Pairwise Alignments

Query, 300 a.a., minor component of type 1 fimbriae (NCBI) from Escherichia coli BW25113

Subject, 320 a.a., S-fimbrial protein subunit SfaH from Escherichia fergusonii Becca

 Score =  173 bits (439), Expect = 4e-48
 Identities = 112/302 (37%), Positives = 162/302 (53%), Gaps = 15/302 (4%)

Query: 11  LLMGWSVNAWSFACKTANGTAIPIGGGSANVYVNLAPVVNVGQNL-VVDLSTQIFCHN-D 68
           L+M +S  +++  C+  N T      G +   + L+P V   + + V+DL+  + C N D
Sbjct: 20  LIMAYSQPSFALLCRN-NQTGQTFQSGDSRFNITLSPTVQYDKAITVLDLNQLVLCQNED 78

Query: 69  YPETITDYVTLQRGSAYGGVLS-----NFSGTVKYSGSSYPFPTTSETP--RVVYNSRTD 121
                 DY+ +++G+ +   L          T + SG S   P   +T      +     
Sbjct: 79  ASGQNYDYLRVRQGTGFSPSLDAKTYGRLDFTNRLSGYSQTLPLQQDTKPTEAYWQYGVW 138

Query: 122 KPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQ--TNNYNSDDFQFVWNIYANNDVVVPT 179
           KP+P  +YL P     G  I AG L+A + + +  T    + +  F W  YA NDV +  
Sbjct: 139 KPFPAKMYLYPEPGVFGKLIHAGELVATVYVNKFSTMGQEAGERNFTWRFYATNDVYIQA 198

Query: 180 GGCDVSARDVTVTLPDYPGS-VPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTASFSP 238
           G C VS+ +V V LPDYPG  V +PLTV C ++Q++ Y LSG+   +GN++F NTA+ S 
Sbjct: 199 GTCRVSSNNVKVNLPDYPGGPVTVPLTVRCDQTQSVSYTLSGSVTGSGNTVFANTAT-SG 257

Query: 239 AQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTG-GQVTAGNVQSIIGVTF 297
           A GVGVQL+ N  ++PA    SLG VG+S VSLGL A+YA TG    T G VQS+I VTF
Sbjct: 258 AGGVGVQLSDNAGLVPAGQPRSLGQVGSSPVSLGLKASYALTGQASPTPGAVQSVINVTF 317

Query: 298 VY 299
            Y
Sbjct: 318 SY 319