Pairwise Alignments

Query, 332 a.a., DNA-binding transcriptional repressor, 5-gluconate-binding (NCBI) from Escherichia coli BW25113

Subject, 339 a.a., Transcriptional regulator, LacI family from Pseudomonas putida KT2440

 Score =  179 bits (454), Expect = 9e-50
 Identities = 108/324 (33%), Positives = 172/324 (53%), Gaps = 3/324 (0%)

Query: 5   RISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYIPNRAPGMLLNAQSY 64
           R +L ++A L+GV+ +T SR +R    VA +  E++      + Y+ N A   L +A+S 
Sbjct: 11  RPTLAEVARLSGVSPITASRALRGVSTVAPDLVEKVIAAAANLGYVANPAARALASARSQ 70

Query: 65  TLGILIPSFQNQLFADILAGIESVTSEHNYQTLIANYNYDRDSEEESVINLLSYNIDGII 124
           ++ +LIPS  NQLF D L  I  V      + LI NY+YD   EE  + N L+Y   GI+
Sbjct: 71  SVVVLIPSLSNQLFIDTLEAIHEVMRPRGLEVLIGNYHYDLAEEENLIRNYLAYQPCGIL 130

Query: 125 LSEKYHTIRTVKFLRSATIPVVELMDVQGERLDMEVGFDNRQAAFDMVCTMLEKRVRHKI 184
           L+    +    + L ++ +P V +M++ GE   + VGF   QA       ++E R R ++
Sbjct: 131 LTGFERSDAARQMLVASGVPCVHMMELNGEPGALSVGFSQHQAGRAAARHLIE-RGRKRL 189

Query: 185 LYLGSKDDTRDEQRYQGYCDAMMLHNLSPLRMNPRA--ISSIHLGMQLMRDALSANPDLD 242
            ++ ++ D R  QR +G+  A+    L    +   A   SSI LG  L    +   PD+D
Sbjct: 190 AFIAAQLDPRVMQRAEGFRQALAEAGLQAAELEVLAPEPSSIALGSVLFSQLMQQAPDVD 249

Query: 243 GVFCTNDDIAMGALLLCRERNLAVPEQISIAGFHGLEIGRQMIPSLASVITPRFDIGRMA 302
           G+F  NDD+A GA+L    + + VP Q+++ GF+ L     M+P L S+ TPR  +GR A
Sbjct: 250 GIFFCNDDLAQGAVLQALRQGVEVPRQVAMVGFNDLPASAHMVPRLTSIRTPRAAVGRGA 309

Query: 303 AQMLLSKIKNNDHNHNTVDLGYQI 326
           AQ LL+ +      +   DLG+++
Sbjct: 310 AQALLALLDGKRVTNAQQDLGFEL 333