Pairwise Alignments

Query, 332 a.a., DNA-binding transcriptional repressor, 5-gluconate-binding (NCBI) from Escherichia coli BW25113

Subject, 331 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

 Score =  292 bits (748), Expect = 7e-84
 Identities = 153/332 (46%), Positives = 221/332 (66%), Gaps = 1/332 (0%)

Query: 1   MRNHRISLQDIATLAGVTKMTVSRYIRSPKKVAKETGERIAKIMEEINYIPNRAPGMLLN 60
           M+  R  LQD+A   GVTKMTVSR++R+P++V+     +IA  ++E+ YIPNRAP +L N
Sbjct: 1   MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAALDELGYIPNRAPDILSN 60

Query: 61  AQSYTLGILIPSFQNQLFADILAGIESVTSEHNYQTLIANYNYDRDSEEESVINLLSYNI 120
           A S  +G+L+PS  NQ+FA++L GIESVT  H YQT++A+Y Y  + E+E + ++LS+NI
Sbjct: 61  ATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYGYKPEMEQERLESMLSWNI 120

Query: 121 DGIILSEKYHTIRTVKFLRSATIPVVELMDVQGERLDMEVGFDNRQAAFDMVCTMLEKRV 180
           DG+IL+E+ HT RT+K +  A IPVVELMD +   LD+ VGFDN +AA  M   ++ +  
Sbjct: 121 DGLILTERTHTPRTLKMIEVAGIPVVELMDSKSPCLDIAVGFDNFEAARQMTTAIIARGH 180

Query: 181 RHKILYLGSKDDTRDEQRYQGYCDAMMLHNLSPLRMNPRAISSIHLGMQLMRDALSANPD 240
           RH I YLG++ D R   + +GY  AM+   L P  +     SS   G++L+R A    P 
Sbjct: 181 RH-IAYLGARLDERTIIKQKGYEQAMLDAGLVPYSVMVEQSSSYSSGIELIRQARREYPQ 239

Query: 241 LDGVFCTNDDIAMGALLLCRERNLAVPEQISIAGFHGLEIGRQMIPSLASVITPRFDIGR 300
           LDGVFCTNDD+A+GA   C+   L VP+ ++IAGFHG +IG+ M P LASV+TPR  +G 
Sbjct: 240 LDGVFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHGHDIGQVMEPRLASVLTPRERMGS 299

Query: 301 MAAQMLLSKIKNNDHNHNTVDLGYQIYHGNTL 332
           + A+ LL++I+        +DLG+ +  G ++
Sbjct: 300 IGAERLLARIRGESVTPKMLDLGFTLSPGGSI 331