Pairwise Alignments

Query, 366 a.a., conserved inner membrane protein (NCBI) from Escherichia coli BW25113

Subject, 373 a.a., Lipopolysaccharide export system permease protein LptF from Variovorax sp. SCN45

 Score =  103 bits (256), Expect = 1e-26
 Identities = 81/313 (25%), Positives = 142/313 (45%), Gaps = 7/313 (2%)

Query: 1   MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMA 60
           M+    L +E  +S  A L +L+ I     L+R LG A  G +    V  ++   V    
Sbjct: 1   MLFHSSLRKELSRSFGATLVVLVTIVMTMMLIRTLGLASKGSVNPQEVFLVMAYTVLGYM 60

Query: 61  QLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAVNVMWA 120
             IL LSLF+ ++ TL ++Y +SE+ +  + G      VK     A    I+ AV  +  
Sbjct: 61  PTILSLSLFIAIVGTLSRMYRDSEMVIWFSSGRGLMDFVKPLFRFAWPVLILIAVMALVG 120

Query: 121 GPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFI--ESVDGSDFKDVFLAQIR 178
            PW++     +  + +    +  +A G+F+++     V FI  E+ D S   +VF+  + 
Sbjct: 121 WPWANSQTIGMRKQYEQRSDIERVAPGEFRESAGRVRVFFIDKETPDNSKATNVFIWSVE 180

Query: 179 PKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAII-GHQ 237
                  S   A SG +  + D S+ + LN G R E        +I++F+ Y     G  
Sbjct: 181 RNMQITTS---ARSGSIENIGD-SRYLLLNNGQRLEQPMANTGLKISEFKTYGTRAGGSD 236

Query: 238 AVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVL 297
            +  D   +      +L    +D +R EL WRI ++ T     L+ + +S  NPR GR  
Sbjct: 237 GLTNDATPSRARTTLSLLTDPSDMSRGELAWRIGMLLTAVNFVLLALNVSSANPRVGRSG 296

Query: 298 SMLPAMLLYLLFF 310
           ++L A+  +++++
Sbjct: 297 NLLLALFAFVVYY 309