Pairwise Alignments

Query, 331 a.a., putative transport system permease protein (VIMSS) from Escherichia coli BW25113

Subject, 321 a.a., ribose ABC transporter permease from Escherichia coli ECRC101

 Score =  169 bits (429), Expect = 7e-47
 Identities = 111/291 (38%), Positives = 160/291 (54%), Gaps = 18/291 (6%)

Query: 24  TQFPGFASTRVICNILTDNAFLGIIAVGMTFVILSGGIDLSVGSVIAFTGVFLAKVIGDF 83
           T  P F +   + NIL   +   I+AVGMT VIL+ GIDLSVGS++A TG   A ++G  
Sbjct: 35  TLSPNFFTINNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALTGAVAASIVG-I 93

Query: 84  GLSPLLAFPLVLVMGCAFGAFMGLLIDALKIPAFIITLAGMFFLRGVSYLVSEESIPINH 143
            ++ L+A    L +G A GA  G+++   ++ AFI TL  M  LRGV+ + +  S P+N 
Sbjct: 94  EVNALVAVAAALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVTMVYTNGS-PVNT 152

Query: 144 PIYDTLSSLAWKIPGGGR-------LSAMGLLMLAVVVIGIFLAHRTRFGNQVYAIGGNA 196
              +      W   G GR       +  MG++ LA      ++ H TR G  +YA+GGN 
Sbjct: 153 GFTENADLFGWF--GIGRPLGVPTPVWIMGIVFLAAW----YMLHHTRLGRYIYALGGNE 206

Query: 197 TSANLMGISTRSTTIRIYMLSTGLATLAGIVFSIYTQAGYALAGVGVELDAIASVVIGGT 256
            +  L GI+     I +Y L   LA+LAGI+      +    AG G ELDAIA+VV+GGT
Sbjct: 207 AATRLSGINVNKIKIIVYSLCGLLASLAGIIEVARLSSAQPTAGTGYELDAIAAVVLGGT 266

Query: 257 LLSGGVGTVLGTLFGVAIQGLIQTYINFDGTLSSWWTKI--AIGILLFIFI 305
            L+GG G ++GTL G  I G +   +N  G +SS++  I  A+ ILL + +
Sbjct: 267 SLAGGKGRIVGTLIGALILGFLNNGLNLLG-VSSYYQMIVKAVVILLAVLV 316