Pairwise Alignments

Query, 418 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

Subject, 537 a.a., Aspartate-proton symporter from Pseudomonas putida KT2440

 Score = 82.4 bits (202), Expect = 3e-20
 Identities = 100/440 (22%), Positives = 186/440 (42%), Gaps = 41/440 (9%)

Query: 1   MSG-LKQELGLAQGIGLLSTSLLGTGVFAVPALAALVAGNNSLWAWPVLIILVFPIAIVF 59
           MSG  K++L L     +   ++ G+G     +  + +AG   + +W +    V  + IV+
Sbjct: 1   MSGKFKKQLSLLDLTFIGLGAIFGSGWLFAASHVSAIAGPAGILSWFLGGFAVLLLGIVY 60

Query: 60  AILGRHYPSAGGVAHFVGMAFGSRLERVTGWL----FLSVIPVGLPAALQIAAGFGQAMF 115
             LG   P AGGV  +   + G  L  + G++    F S+I + + A+ Q AA +   + 
Sbjct: 61  CELGAALPRAGGVVRYPVYSHGPLLGYLMGFITLIAFSSLIAIEVVASRQYAAAWFPGLT 120

Query: 116 GWHS-------WQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVAIWWAGDI 168
              S       W +  A LG    + Y   +  + + NL +V   ++  L++ + +    
Sbjct: 121 KAGSSDPTVLGWLVQFALLGLFFFLNYRSVKTFAKANNLVSVFKFIVPLLVIGVLFTF-F 179

Query: 169 KPANIPFPAPGNIELTGLFAALSV--MFWCFVGLEAFAHLASEFKNPERDFPRALMIGLL 226
           KP N          L+G+  A+S   + + ++GL     +ASE KNP+R  P AL++ +L
Sbjct: 180 KPENFEVQGFAPFGLSGVEMAVSAGGIIFAYLGLTPIISVASEVKNPQRTIPIALILSVL 239

Query: 227 LAGLVY-------WGCTVVVLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVI---GY 276
           L+  +Y        G     +  + +       A   + +    GVG  W+A ++     
Sbjct: 240 LSTAIYALLQLAFLGSVPTEMLANGWASVTKELALPYRDIALALGVG--WLAYLVVADAV 297

Query: 277 LACFASLNIYIQSFARLVWSQAQHNP-DHYLARLSSRH-IPNNALNAVLGCCVVSTLVIH 334
           ++     NIY+ +  R+++  AQ      Y  R+ +   IP  AL    G  V  TL   
Sbjct: 298 ISPSGCGNIYMNATPRVIYGWAQTGTFFKYFTRIDAESGIPRPALWLTFGLSVFWTLPFP 357

Query: 335 ALEINLDALIIYANGIFIMIYLLCMLAGCKLLQG--------RYRLLAVVGGLLCVLLLA 386
           + E    ALI   +   ++ Y +  ++   L +         R + + V+G L  ++   
Sbjct: 358 SWE----ALINVVSAALVLSYAVAPVSVAALRRNAPHMPRPFRVKGMTVLGPLSFIIAAL 413

Query: 387 MVGWKSLYALIMLAGLWLLL 406
           +V W     +  L  L +++
Sbjct: 414 IVYWSGWNTVSWLLALQIVM 433