Pairwise Alignments

Query, 418 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

Subject, 450 a.a., putrescine permease from Pseudomonas putida KT2440

 Score = 66.2 bits (160), Expect = 2e-15
 Identities = 95/389 (24%), Positives = 166/389 (42%), Gaps = 63/389 (16%)

Query: 56  AIVFAILGRHYPSAGGVAHFVGMAFGSRLERVTGWLFLS---VIPV--GLPAALQIAAGF 110
           A+ +  L + +P +G    +   A    +  + GW  L    ++P+   L A L ++A F
Sbjct: 65  AVSYGTLVKRFPQSGSAYTYTQRAINPHVGFLVGWSSLLDYLLLPMVNALLAKLYLSAMF 124

Query: 111 GQAMFGWHSWQLLLAELGTLALVWYIGTRGASSSANLQTVIAGLIVALIVAIWWA----- 165
            +       W  +    G + L+  I  R  +  A+   +  G+ VA+I    +      
Sbjct: 125 PEVP----EWMWVA---GFVTLISLINMRSVNLVAHFNLLFVGVQVAIIAVFIYLCVRGL 177

Query: 166 --GDIKPAN---IPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFPRA 220
             G+        IPF A    + + L A  +++ + F+G +A   L+ E ++P +  PRA
Sbjct: 178 DQGEGLGTTWSLIPF-ADSQTQFSALAAGATILCFSFLGFDAVTCLSEETRDPAKTIPRA 236

Query: 221 LMIGLLLAGLVYWGCTVVVLHF-DAYGEKMA----AAASLPKIVVQLFG--VGALWIACV 273
           + +  L+ G+V+    + V +F  AY   MA      A+LP+I + + G    +++IAC 
Sbjct: 237 IFLTALIGGVVF----ITVSYFIQAYFPTMARFHDQEAALPEIALYVGGKLFQSIFIACT 292

Query: 274 IGYLACFASLNIYIQSFARLVWSQAQHN--PDHYLARLSSRHIPNNALNAVLGCCVVST- 330
           +  +   AS      S +RL++   + N  P    ARL SR+       AV+G   +S  
Sbjct: 293 V--INTIASGLASQTSVSRLLYVMGRDNVIPASVFARLHSRYKTPVLNIAVVGLISLSAI 350

Query: 331 ---LVIHALEINLDALIIYANGIFIMIYLLCMLAGCKLLQG---------RYRLLAVVGG 378
              LV     IN  AL+ ++         L ++  C L +G         +Y +L  +G 
Sbjct: 351 FFDLVTATSIINFGALVAFS------FVNLSVINHCYLREGNRKGLANQLKYLVLPTIGF 404

Query: 379 LLCVLLLAMVGWKSLYA-LIMLAGLWLLL 406
            + V L     W  L A  +M  G+W  L
Sbjct: 405 CIIVSL-----WLDLNAHSLMFGGIWAAL 428