Pairwise Alignments

Query, 473 a.a., melibiose:sodium symporter (NCBI) from Escherichia coli BW25113

Subject, 444 a.a., Melibiose carrier protein, Na+/melibiose symporter from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  163 bits (413), Expect = 1e-44
 Identities = 126/464 (27%), Positives = 213/464 (45%), Gaps = 36/464 (7%)

Query: 1   MSISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDP 60
           M +S+  K+ +G G    +  I  + + L Y+YTD+ GLS   VG LF+V R+ DAI DP
Sbjct: 1   MKLSIVEKIGFGAGDMAINVVIIAMQLLLAYFYTDIYGLSAADVGVLFVVVRMIDAIIDP 60

Query: 61  IMGWIVNATRSRWGKFKPWILIGTLANSVILFLLFSAHLFEGTTQIVFVCVTYILWGMTY 120
            MG + +   +RWG+++PW+L   +     ++L+F         ++ +   TYIL  + Y
Sbjct: 61  AMGVLTDKLNTRWGRYRPWLLWFAIPFGFAVYLMFITPDMAYMAKLAWAYGTYILMTLVY 120

Query: 121 TIMDIPFWSLVPTITLDKREREQLVPYPRFFASLAGFVTAGVTLPFVNYVGGGDRGFGFQ 180
           T + IP+ S++  IT D  ER     Y      +A F+   V      ++G G++  G+Q
Sbjct: 121 TAITIPYISMIGVITSDPVERLSANGYRFVMTKIAAFLVTIVVPMLAVWLGQGNKALGYQ 180

Query: 181 MFTLVLI----AFFIVSTIITLRNVHEVFSSDNQPSAEGSHLTLKAIVALIYKNDQLSCL 236
            F++ L+    A   +   +T R   E          E + L++      + +NDQ   +
Sbjct: 181 -FSMGLMGAMGALLFIFCFLTTRERSE---------PEITSLSVGKQFKYLLRNDQW-II 229

Query: 237 LGMALAYNVASNIITG-FAIYYFSYVIGDAD-LFPYYLSYAGAANLVTLVFFPRLVKSLS 294
           LG+ +   +   +I G  A YY  Y +   D L   +L+    A+++ ++    + K   
Sbjct: 230 LGVVILLLMCGYVIRGSVAAYYAKYYLNGGDSLISPFLTTGVVASILAMIATTWITK--- 286

Query: 295 RRILWAGASILPVLSCGVLLLMALMSY----HNVVLIVIAGILLN----VGTALFWVLQV 346
               W    +         +L ALM +     N+VL      L+N    +   +FW    
Sbjct: 287 ---FWDKIKMFRYTQIITFILSALMYFSVGRENLVLAFAFYFLINFFCDMQMPVFW---- 339

Query: 347 IMVADIVDYGEYKLHVRCESIAYSVQTMVVKGGSAFAAFFIAVVLGMIGYVPNVEQSTQA 406
             +A+ VDYGE K  +R   +A+       K G   A   +  +L   GY  +VEQS ++
Sbjct: 340 SSIAEAVDYGEKKTGLRVSGLAFGGILFFQKFGMGIAGGILGFLLSHFGYQADVEQSARS 399

Query: 407 LLGMQFIMIALPTLFFMVTLILYFRFYRLNGDTLRRIQIHLLDK 450
           L G+  +M  +P LF +   +L  + Y +N +  R IQ+ L  K
Sbjct: 400 LTGIALMMTLIPALFHLAVGLL-MKKYLINNEYYRDIQLALAQK 442