Pairwise Alignments

Query, 473 a.a., melibiose:sodium symporter (NCBI) from Escherichia coli BW25113

Subject, 460 a.a., putative transporter from Escherichia coli BL21

 Score =  200 bits (508), Expect = 1e-55
 Identities = 126/456 (27%), Positives = 232/456 (50%), Gaps = 18/456 (3%)

Query: 3   ISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIM 62
           +S+  K+ YG G          V +Y+M++YTD+ G+  G VGT+FLVAR  DAI+DP M
Sbjct: 6   LSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCM 65

Query: 63  GWIVNATRSRWGKFKPWILIGTLANSVILFLLFSAHLFEGTTQIVFVCVTYILWGMTYTI 122
           G + + TRSR GKF+PW+L G L   ++  L +S        ++++  +TY L  + YT+
Sbjct: 66  GLLADRTRSRRGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTV 125

Query: 123 MDIPFWSLVPTITLDKREREQLVPYPRFFASLAGFVTAGVTLPFVNYVGGGDRGFGFQ-- 180
           ++IP+ +L   IT D  +R  L  +    A+  G ++  + +P VN +GG ++  GFQ  
Sbjct: 126 VNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGG 185

Query: 181 MFTLVLIAFFIVSTIITLRNVHEVFSSDNQPSAEGSHLTLKAIVALIYKNDQLSCLLGMA 240
           +  L ++AF +++           F++  +  A  +  +++  +  I++NDQ   ++G+ 
Sbjct: 186 IAVLSVVAFMMLAFCF--------FTTKERVEAPPTTTSMREDLRDIWQNDQWR-IVGLL 236

Query: 241 LAYNVASNIITGFA-IYYFSYVIGDADLFPYYLSYAGAANLV-TLVFFPRLVKSLSRRIL 298
             +N+ +  + G A +YY ++++G  ++F  +L+     NL+ + +  P         I 
Sbjct: 237 TIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIF 296

Query: 299 WAGASILPVLSCGVLLLMALMSYHNVVLIVIAGILLNVGTALFWVLQVIMVADIVDYGEY 358
           W   ++L V+S  +  +    S    V I + G+L  + T + WV    M++D VDYGE+
Sbjct: 297 WWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWV----MMSDTVDYGEW 352

Query: 359 KLHVRCESIAYSVQTMVVKGGSAFAAFFIAVVLGMIGYVPNVEQSTQALLGMQFIMIAL- 417
               R   I+++    V+K G AF    I  +L   GY    +    A + +   +  + 
Sbjct: 353 CNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDAAEKAQNSATISIIIALFTIV 412

Query: 418 PTLFFMVTLILYFRFYRLNGDTLRRIQIHLLDKYRK 453
           P + ++++ I+  R+Y L    L+ +   L    R+
Sbjct: 413 PAICYLLSAIIAKRYYSLTTHNLKTVMEQLAQGKRR 448