Pairwise Alignments

Query, 940 a.a., excinuclease ABC subunit A (NCBI) from Escherichia coli BW25113

Subject, 944 a.a., Excinuclease ABC subunit A from Pseudomonas fluorescens GW456-L13

 Score = 1463 bits (3788), Expect = 0.0
 Identities = 714/940 (75%), Positives = 828/940 (88%), Gaps = 1/940 (0%)

Query: 1   MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60
           +DKI +RGARTHNLKNI+L +PRDKLIV+TGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
Sbjct: 1   LDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY 60

Query: 61  ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC 120
           ARQFLS+MEKPDVD IEGLSPAISIEQKSTSHNPRSTVGTITEI+DYLRLL+ARVG PRC
Sbjct: 61  ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGIPRC 120

Query: 121 PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID 180
           PDHD+PL AQTVSQMVD VL++PEG +LMLLAP+I+ERKGEH    E L +QG++RARI+
Sbjct: 121 PDHDIPLEAQTVSQMVDLVLAEPEGSKLMLLAPVIRERKGEHLSVFEELRAQGFVRARIN 180

Query: 181 GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP 240
           G++ +L + PKL+ QKKHTI+VVVDRFKVR DL QRLAESFETAL+L+ G A+VA MDD 
Sbjct: 181 GKLYELDEAPKLDKQKKHTIDVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDE 240

Query: 241 KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL 300
             EE++FSA FACPICG+++ ELEP+LFSFNNPAGACPTCDGLGV+Q+FD  R++ N EL
Sbjct: 241 PGEEMIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDIKRLV-NGEL 299

Query: 301 SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY 360
           +LA GAIRGWDRRN YYFQML SLA HYKF +E P+  L A+  K +L+GSG +N++FKY
Sbjct: 300 TLAEGAIRGWDRRNVYYFQMLGSLASHYKFSLEVPFNELPADQQKFILHGSGSQNVDFKY 359

Query: 361 MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH 420
           +NDRGD   R HPFEG++ N+ERRY+ETES++VREELAKF+S + C  C GTRLRREARH
Sbjct: 360 LNDRGDIVKRSHPFEGIVPNLERRYRETESASVREELAKFLSTQSCPDCRGTRLRREARH 419

Query: 421 VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL 480
           V+V    LPA++++ IG A ++F  LKL G+R +IA+KILKEI +RL+FLVNVGL+YL+L
Sbjct: 420 VWVGEKTLPAVTNLPIGDASDYFGGLKLTGRRGEIADKILKEIRERLQFLVNVGLDYLSL 479

Query: 481 SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT 540
            RSA+TLSGGEAQRIRLASQIGAGLVGV+Y+LDEPSIGLHQRDN+RLLGTL HLRD+GNT
Sbjct: 480 DRSADTLSGGEAQRIRLASQIGAGLVGVLYILDEPSIGLHQRDNDRLLGTLKHLRDIGNT 539

Query: 541 VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV 600
           VIVVEHDEDAIR AD+V+DIGPGAGVHGG +VAEG    +MA P+SLTG+Y+SG+ KIEV
Sbjct: 540 VIVVEHDEDAIRLADYVVDIGPGAGVHGGHIVAEGTPAEVMAHPDSLTGKYLSGRVKIEV 599

Query: 601 PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR 660
           P KR P N +  L L GARGNNL++V L +P+GL TC+TGVSGSGKSTLIN+TLFP++  
Sbjct: 600 PAKRTPRNKKLTLSLKGARGNNLRNVDLEIPIGLLTCVTGVSGSGKSTLINNTLFPLSAT 659

Query: 661 QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE 720
            LNGAT  E A +  I+GLEH DKV+DIDQSPIGRTPRSNPATYTG+FTP+RELFAGVPE
Sbjct: 660 ALNGATTLEAAVHDSIKGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAGVPE 719

Query: 721 SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY 780
           SR+RGY PGRFSFNV+GGRCEACQGDG+IKVEMHFLPDIYVPCD CK KRYNRETLEIKY
Sbjct: 720 SRSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCDVCKSKRYNRETLEIKY 779

Query: 781 KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL 840
           KGK+IHE L+MTIEEAR FFDAVPALARKLQTLMDVGL+YI+LGQSATTLSGGEAQRVKL
Sbjct: 780 KGKSIHETLEMTIEEARVFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKL 839

Query: 841 ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW 900
           +RELSKR TG+TLYILDEPTTGLHFADIQQLLDVLH+LRD GNT+VVIEHNLDVIKTADW
Sbjct: 840 SRELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADW 899

Query: 901 IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940
           +VDLGPEGGS GG+I+  GTPE V+E + SHT  +LKP+L
Sbjct: 900 LVDLGPEGGSKGGQIIAVGTPEEVSEMKQSHTGYYLKPLL 939