Pairwise Alignments

Query, 940 a.a., excinuclease ABC subunit A (NCBI) from Escherichia coli BW25113

Subject, 1045 a.a., UvrABC system protein A from Xanthobacter sp. DMC5

 Score = 1187 bits (3072), Expect = 0.0
 Identities = 599/949 (63%), Positives = 747/949 (78%), Gaps = 20/949 (2%)

Query: 4   IEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ 63
           + VRGAR HNLKN++L IPRD L+V TGLSGSGKSSLAFDT+YAEGQRRYVESLSAYARQ
Sbjct: 28  LSVRGAREHNLKNVDLEIPRDSLVVFTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 87

Query: 64  FLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPDH 123
           FL +M+KPDVD I+GLSPAISIEQK+TS NPRSTVGT+TEI+DY+RLL+AR G P  P  
Sbjct: 88  FLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWARTGVPYSPAT 147

Query: 124 DVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGEV 183
            +P+ +QTVSQMVD  L+ PEG RL LLAP+++ RKGE+ K L +   +G+ R +++G  
Sbjct: 148 GLPIESQTVSQMVDRTLALPEGTRLYLLAPVVRGRKGEYRKELADWMKKGFQRVKVNGAF 207

Query: 184 CDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKAE 243
            ++++ P L+ + KH I+VVVDR  VR DL QRLA+SFETAL L+ G AV A+  D K E
Sbjct: 208 HEIAEAPALDKKFKHDIDVVVDRIVVRADLAQRLADSFETALGLADGIAV-AEFADEKDE 266

Query: 244 -----ELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNP 298
                 ++FS  FACP+ G+++ E+EPRLFSFNNP GACP CDGLGV+Q  DPD V+ + 
Sbjct: 267 AGAPRRIIFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPACDGLGVEQTIDPDLVVPDK 326

Query: 299 ELSLAGGAIRGWDRRNF-YYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIE 357
             SL  GAI  W +    YY Q L +LA HY F +  P+  L     +V+L+GSG E I 
Sbjct: 327 ARSLKQGAIAPWAKSTSPYYGQTLDALAKHYHFKLNVPFADLPEQAREVLLFGSGSEKIT 386

Query: 358 FKYMNDRGDTSIRRHP----FEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTR 413
           F Y     D  +R +     FEGV+ N++RR+KET+S   REE++K+ S  PC  C G R
Sbjct: 387 FHY-----DDGMRAYETSKTFEGVVRNLDRRWKETDSDWAREEISKYFSTVPCKVCNGYR 441

Query: 414 LRREARHVYVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLV 471
           L+ EA  V +    +  I ++S+  A  +F +L  +L  ++ +IA +ILKEI +RL+FL+
Sbjct: 442 LKPEALAVKIAGRHIGEIGELSVRAAAGWFESLPAQLTDKQNEIAGRILKEIRERLRFLL 501

Query: 472 NVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTL 531
           +VGL YLTL+RS+ TLSGGE+QRIRLASQIG+GL GV+YVLDEPSIGLHQRDNERLLGTL
Sbjct: 502 DVGLEYLTLARSSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNERLLGTL 561

Query: 532 IHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQY 591
            HLRDLGNTVIVVEHDEDAI AADHV+D+GPGAG+HGGE+VA+G    I+A P SLTG+Y
Sbjct: 562 KHLRDLGNTVIVVEHDEDAILAADHVVDVGPGAGIHGGEIVAQGTPAEILANPASLTGRY 621

Query: 592 MSGKRKIEVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLIN 651
           ++G+  + VP +R P NP+++LKLTGARGNNLK+VT  +P+GLFTCITGVSG GKSTL+ 
Sbjct: 622 LTGELSVGVPARRKP-NPKRMLKLTGARGNNLKNVTAEIPLGLFTCITGVSGGGKSTLLI 680

Query: 652 DTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPV 711
           DTL+    R+LNGA+ A PAP+  ++GLEH DKVIDIDQSPIGRTPRSNPATYTG FTP+
Sbjct: 681 DTLYKAVARRLNGASEA-PAPFDKLEGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFTPI 739

Query: 712 RELFAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRY 771
           RE FAG+PE++ARGY  GRFSFNV+GGRCEACQGDGVIK+EMHFLPD+YV CD CKGKRY
Sbjct: 740 REWFAGLPEAKARGYGAGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCDVCKGKRY 799

Query: 772 NRETLEIKYKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLS 831
           NRETLE+ +K K+I +VLDMT+EE  +FF AVP++  KL+TL  VGL Y+++GQ ATTLS
Sbjct: 800 NRETLEVTFKNKSIADVLDMTVEEGAQFFKAVPSVREKLETLHRVGLDYVKVGQQATTLS 859

Query: 832 GGEAQRVKLARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHN 891
           GGEAQRVKL++ELS+R TG+TLYILDEPTTGLHF D+++LL+VLH+L +QGN++VVIEHN
Sbjct: 860 GGEAQRVKLSKELSRRATGRTLYILDEPTTGLHFHDVKKLLEVLHELVEQGNSVVVIEHN 919

Query: 892 LDVIKTADWIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940
           L+VIKTADWI+DLGPEGG GGGEI+V+GTPETVA  + SHT RFL  +L
Sbjct: 920 LEVIKTADWILDLGPEGGDGGGEIVVAGTPETVAASKRSHTGRFLAEVL 968



 Score = 72.4 bits (176), Expect = 1e-16
 Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 8/135 (5%)

Query: 599 EVPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIA 658
           E P + VP    + L + GAR +NLK+V L +P       TG+SGSGKS+L  DT++   
Sbjct: 14  EAPVREVPRRDARTLSVRGAREHNLKNVDLEIPRDSLVVFTGLSGSGKSSLAFDTIYAEG 73

Query: 659 QRQLNGATIA------EPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVR 712
           QR+   +  A      E     D+  ++     I I+Q    + PRS   T T ++  +R
Sbjct: 74  QRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMR 133

Query: 713 ELFA--GVPESRARG 725
            L+A  GVP S A G
Sbjct: 134 LLWARTGVPYSPATG 148