Pairwise Alignments

Query, 940 a.a., excinuclease ABC subunit A (NCBI) from Escherichia coli BW25113

Subject, 971 a.a., ABC-ATPase UvrA from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  963 bits (2490), Expect = 0.0
 Identities = 493/941 (52%), Positives = 679/941 (72%), Gaps = 15/941 (1%)

Query: 3   KIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYAR 62
           +IEV GAR HNLKNI++ +PR KL+V TG+SGSGKSSLAFDT+YAEGQRRY+E+ SAYAR
Sbjct: 29  QIEVYGAREHNLKNISIKLPRYKLVVFTGISGSGKSSLAFDTIYAEGQRRYMETFSAYAR 88

Query: 63  QFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRCPD 122
            F+  +E+P+VD IEGLSP ISIEQK+TS NPRSTVGTITEI+D++RLL+AR  E     
Sbjct: 89  SFMGGLERPNVDKIEGLSPVISIEQKTTSRNPRSTVGTITEIYDFMRLLWARTAEAYSYV 148

Query: 123 HDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARIDGE 182
               +  Q+  Q+V+++L   +GKR+++LAP++K RKG + +  + +   G+IRAR+DGE
Sbjct: 149 TGEKMVRQSDDQIVNHILENFDGKRIVVLAPVVKGRKGHYRELFQQIRKMGFIRARVDGE 208

Query: 183 VCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDPKA 242
           + +++   +++  K H IE+V+D+  V+++   RL+ S + AL    GTA++ D D  K 
Sbjct: 209 LVEIAPKMQVDRYKIHDIEIVIDKIVVKEEDRFRLSGSIQNALTHGKGTALILDADADKT 268

Query: 243 EELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPELSL 302
               FS +   P  G +  +  P  FSFN+P GACP C+GLG  Q    + VI + ELS+
Sbjct: 269 H--FFSRHLMDPATGIAYDDPAPNSFSFNSPYGACPVCNGLGEIQEITEETVIPDKELSI 326

Query: 303 AGGAIRGW-DRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKYM 361
             G I    + R+ + F+ +++L  H+K  V  P   L  ++ +V+LYG  +E++E K  
Sbjct: 327 RRGGIAPLGEYRDIWIFKQIEALFKHFKASVATPIKDLPEDLLQVLLYGL-EEDLEVK-- 383

Query: 362 NDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARHV 421
             +G+  +    FEG++ N  +   E++S ++R  +  F     C  C G RL++E+ H 
Sbjct: 384 TKKGNYVVE---FEGII-NFLKNQMESDSDSIRSWVEDFTQTTTCPECNGYRLKKESLHF 439

Query: 422 YVENTPLPAISDMSIGHAMEFFNNL--KLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLT 479
            + +  +  +S + I     +F  L  +++ ++  IA+++LKEI  R+ FL++VGL+YL+
Sbjct: 440 KIADKNIGELSVLDITKLAAWFEALEDRMSERQNVIAKELLKEIRKRIGFLLDVGLDYLS 499

Query: 480 LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGN 539
           L R   TLSGGE+QRIRLA+QIG  LVGV+Y++DEPSIGLHQRDNERL+  L  LRDLGN
Sbjct: 500 LHRPVRTLSGGESQRIRLATQIGTQLVGVLYIMDEPSIGLHQRDNERLINALKDLRDLGN 559

Query: 540 TVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIE 599
           ++IVVEHD+D I  +D+V+DIGPGAG+HGG+VV  G  E +M    + T  ++S +R I 
Sbjct: 560 SIIVVEHDKDMILQSDYVVDIGPGAGIHGGQVVTAGTPETMMNAGTT-TADFLSNRRGIA 618

Query: 600 VPKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQ 659
           VP+++ P   +  L+L GA G+NLK+VTL LP+G   C+TGVSGSGKS+LI+DTL+PI  
Sbjct: 619 VPREKRPGTGQ-TLRLIGATGHNLKNVTLELPLGKMICVTGVSGSGKSSLIHDTLYPILN 677

Query: 660 RQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVP 719
                A   EP PY+ I+GLEH DKVI++DQSPIGRTPRSNPATYTGVFT +R LFA +P
Sbjct: 678 THFFRAK-REPLPYKSIEGLEHIDKVIEVDQSPIGRTPRSNPATYTGVFTDIRSLFAQLP 736

Query: 720 ESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIK 779
           E++ RGYTPGRFSFNV+GGRCEAC+G G+  +EM+FLPD+YVPC+ CKGKRYNRETLE++
Sbjct: 737 EAKIRGYTPGRFSFNVKGGRCEACEGAGMRTIEMNFLPDVYVPCEVCKGKRYNRETLEVR 796

Query: 780 YKGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVK 839
           +KGK+I +VL+MT+E+A EFF++ P + RK+QTL +VGL YI LGQ ATTLSGGEAQRVK
Sbjct: 797 FKGKSITDVLEMTVEQAVEFFESQPRILRKIQTLNEVGLGYITLGQQATTLSGGEAQRVK 856

Query: 840 LARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTAD 899
           LA ELSK+ TGQTLYILDEPTTGLHF DI+ L +VLHKL ++GNT+++IEHNLD+IK AD
Sbjct: 857 LATELSKKDTGQTLYILDEPTTGLHFQDIEHLTEVLHKLTNKGNTVLIIEHNLDLIKVAD 916

Query: 900 WIVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML 940
           +++D+GPEGG GGG I+ +GTPE V      +T+RFL+  L
Sbjct: 917 YVIDIGPEGGEGGGTIVAAGTPEEVVAAGKGYTSRFLEEEL 957



 Score =  134 bits (337), Expect = 3e-35
 Identities = 75/194 (38%), Positives = 114/194 (58%), Gaps = 15/194 (7%)

Query: 405 PCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIG 464
           PC  C+G R  RE   V  +   +  + +M++  A+EFF +            +IL++I 
Sbjct: 779 PCEVCKGKRYNRETLEVRFKGKSITDVLEMTVEQAVEFFES----------QPRILRKI- 827

Query: 465 DRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVG-VMYVLDEPSIGLHQRD 523
              + L  VGL Y+TL + A TLSGGEAQR++LA+++     G  +Y+LDEP+ GLH +D
Sbjct: 828 ---QTLNEVGLGYITLGQQATTLSGGEAQRVKLATELSKKDTGQTLYILDEPTTGLHFQD 884

Query: 524 NERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAV 583
            E L   L  L + GNTV+++EH+ D I+ AD+VIDIGP  G  GG +VA G  E ++A 
Sbjct: 885 IEHLTEVLHKLTNKGNTVLIIEHNLDLIKVADYVIDIGPEGGEGGGTIVAAGTPEEVVAA 944

Query: 584 PESLTGQYMSGKRK 597
            +  T +++  + K
Sbjct: 945 GKGYTSRFLEEELK 958