Pairwise Alignments

Query, 732 a.a., primosome assembly protein PriA (NCBI) from Escherichia coli BW25113

Subject, 840 a.a., primosomal protein N' from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  367 bits (941), Expect = e-105
 Identities = 204/550 (37%), Positives = 309/550 (56%), Gaps = 12/550 (2%)

Query: 189 NYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQA 248
           N       ++L   Q   + +I    D     LL G+TGSGKTE+Y+ ++  VL  G Q 
Sbjct: 293 NLPSDDREIKLADFQEEGLSSIKEQFDQKQTVLLHGITGSGKTEIYIHLIREVLDSGSQV 352

Query: 249 LVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALF 308
           L+++PEI LT Q ++R ++ F + + + HS  +D+ER+  W    +G  + V+G RSA+F
Sbjct: 353 LLLLPEIALTTQIVSRLQKVFGSEMGIYHSKHSDNERVEVWQGVLSGRFSFVVGVRSAIF 412

Query: 309 TPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSATPALETLCNV 367
            PF +LG+I++DEEH+ SYKQ +   R+ ARD A+  +   Q   +LGSATP+ E+  N 
Sbjct: 413 LPFDSLGMIIVDEEHEPSYKQFDPAPRFQARDAAIMLSWLHQSKTLLGSATPSYESFYNA 472

Query: 368 QQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA----DNQVIL 423
           + +KY  + L++R G A+    HV D+   K +  L       MR+ +Q       Q+++
Sbjct: 473 RTQKYGYVHLSKRFGEAQLPEFHVADILVDKKKNLLKLDFTRIMREKIQEALDRQEQILI 532

Query: 424 FLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTH 483
           F NRRG+AP + C +CGWI EC  CD   T HQ    +RCH+C  +  VPR CP+CGS  
Sbjct: 533 FQNRRGYAPYMSCEECGWIPECEHCDVNLTYHQYSEEMRCHYCGFKEKVPRACPACGSHK 592

Query: 484 LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLA 543
           L  VG+GTE+LE++L+ LFP   + R+D DTT  K A ++   E   G   IL+GTQM+ 
Sbjct: 593 LTTVGIGTERLEESLSLLFPEARVGRMDLDTTRSKYAYQRIFDEFSSGNLDILVGTQMIT 652

Query: 544 KGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEH 603
           KG  F  VT+V ++D D  L+  DFRS ER  Q  TQVAGRAGR  ++G VV+QT  P+H
Sbjct: 653 KGLDFDRVTVVGIVDADRILYFPDFRSGERAFQQITQVAGRAGRRNRRGNVVIQTRRPDH 712

Query: 604 PLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSS 663
            + + ++   +  F    +AER+    PP+  +V + +     + A      L NL+   
Sbjct: 713 EVFEKVIQGNFSEFYLTEMAERKRFFYPPFVKNVKITSRHKEAKVAEKAAINLANLLKDI 772

Query: 664 PLADEKLWVLGPVPALAPKRGGRWRWQILLQ----HPSRVRLQHIINGTLALINTIPDSR 719
           P+   K  +LGP  AL  K   ++ + I ++      +    +H +   L  +NT    +
Sbjct: 773 PV---KKIILGPERALIGKIKNQYLFDIYIKLDRAGNTPAIFKHEMGKILFELNTQKAFK 829

Query: 720 KVKWVLDVDP 729
            V++V+DVDP
Sbjct: 830 SVRFVVDVDP 839



 Score = 65.5 bits (158), Expect = 1e-14
 Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 3/100 (3%)

Query: 4   AHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61
           A V LPVP+PR F Y +P  M  ++  G RV V FG+++   GI+  V         E K
Sbjct: 21  ADVILPVPIPRMFTYRIPRTMEKSIGIGHRVIVQFGRKKVLTGIIGKVHQKPPKDY-ETK 79

Query: 62  AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101
           A++EVLD +PV      +   W A+YY   IG+V+  ALP
Sbjct: 80  AILEVLDDQPVVNPLQIKFWFWMAEYYCCQIGEVMNAALP 119