Pairwise Alignments

Query, 732 a.a., primosome assembly protein PriA (NCBI) from Escherichia coli BW25113

Subject, 738 a.a., primosomal protein N' from Agrobacterium fabrum C58

 Score =  363 bits (933), Expect = e-104
 Identities = 245/736 (33%), Positives = 376/736 (51%), Gaps = 37/736 (5%)

Query: 6   VALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVE 65
           V +P+P P  + Y +PE M V+ G  V+VP G +Q   G+V   +    +   +L+ + +
Sbjct: 24  VLVPLPAPGPYSYAVPEDMVVETGSVVQVPLGPRQV-FGVVWDDAGEKGVDPKKLRPITK 82

Query: 66  VLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAA--NAPMWYWFATEQ 123
             +  P+    + R + W A Y   P G V   AL        PAA    PM       +
Sbjct: 83  SFECPPLKVE-MRRFVDWVAAYTLSPPGLVARMALRA------PAAFDPEPMIEGLRLTE 135

Query: 124 GQAVDLNSLKRSPKQQQALAALRQGKIWRDQ--VATLEFNDAALQALRKKGLCDLA--SE 179
           G+   L     +P +++ +    +G+ W           + + +  L K+G+ +      
Sbjct: 136 GRPERL-----TPARERVMELAAEGQGWTKSGLAHAAGVSTSVIDGLVKQGVFETVFLPA 190

Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239
            P  ++   +Y     RL    +QA +          F   L+ GVTGSGKTEVY   + 
Sbjct: 191 PPVVAEPDPDYVEP--RLEGPQKQAASEIIEDVRKGGFHVSLIDGVTGSGKTEVYFEAVA 248

Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299
             L QGKQ L+++PEI LT   + RF++RF A     HS L+   R   W +A  GE  +
Sbjct: 249 ETLRQGKQVLILLPEIALTAAFLERFQDRFGAKPAEWHSDLSPRMREKVWRQAVTGEIKV 308

Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359
           V G RSALF PF NLG+I++DEEHD +YKQ++   Y+ARD+AV RA   + P++L SATP
Sbjct: 309 VAGARSALFLPFDNLGLIIVDEEHDPAYKQEDRVFYNARDMAVVRARIAEFPVVLVSATP 368

Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPALITRMRQHLQA 417
           ++E+  N    +Y  + L  R G+A     H++D++    + G  L+P L+  + + ++ 
Sbjct: 369 SVESQVNGSSGRYNTIHLHTRFGDAAMPDLHLVDMRRHPPERGGFLSPVLLRGIGKTIEK 428

Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477
             Q +LFLNRRG+AP  LC  CG   +CP+C  +   H+ ++ L+CH C    P P  CP
Sbjct: 429 GEQSLLFLNRRGYAPLTLCRVCGHRFQCPQCSSWLVEHRFRNQLQCHQCGHNEPTPDHCP 488

Query: 478 SCGS-THLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536
            CG+  HLV  G G E++ + +   FP      +  D    K  L  +L  + +G A I+
Sbjct: 489 ECGTFDHLVACGPGVERIAEEVEKHFPEARTIVLSSDLMGVK-RLRLELEAIVKGEADIV 547

Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596
           IGTQ++AKGH+FP +TLV ++D D  L + D R+AER  QL +QV GRAGR G +   +L
Sbjct: 548 IGTQLVAKGHNFPLMTLVGIVDADLGLANGDPRAAERTFQLLSQVTGRAGRTGLKSHGLL 607

Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPW--TSHVIVRAEDHNNQHAPLFLQ 654
           QT+ P+HP++Q ++     AF E+ + ER    LPP+   + +IV A+            
Sbjct: 608 QTYQPQHPVMQAIVSGDASAFYEREIVEREKAVLPPFGRLASIIVSADTRAEAET----- 662

Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714
             R L  ++P     + +LGP  A      GR R+++L+       +Q  +   LA   +
Sbjct: 663 HARGLRAAAPQV-TGIMLLGPAEAPLALIRGRHRFRLLVHGRRNSDMQSFLRTLLA---S 718

Query: 715 IPDSR-KVKWVLDVDP 729
            P  R  V   LD+DP
Sbjct: 719 GPKERGSVHVQLDIDP 734