Pairwise Alignments

Query, 341 a.a., DNA-binding transcriptional dual regulator (NCBI) from Escherichia coli BW25113

Subject, 330 a.a., ribose operon transcriptional repressor RbsR from Escherichia coli ECOR38

 Score =  197 bits (502), Expect = 2e-55
 Identities = 110/309 (35%), Positives = 182/309 (58%), Gaps = 5/309 (1%)

Query: 10  ATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRT 69
           ATMKDVA  A VST+TVS  +     VS+A   +VE A +E+ Y P  + R++K N++ T
Sbjct: 2   ATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELNYAPSALARSLKLNQTHT 61

Query: 70  ILVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLL 129
           I +++    +PF+SE++RG+E +    GY +++ +     Q+    ++ ++ K++DG+LL
Sbjct: 62  IGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLL 121

Query: 130 LGSRL--PFDASIEEQRNLPPMVMANEFAP-ELELPTVHIDNLTAAFDAVNYLYEQGHKR 186
           L +    P    ++    +P ++M  ++AP + +   +  ++L     A  YL ++GH R
Sbjct: 122 LCTETHQPSREIMQRYPTVPTVMM--DWAPFDGDSDLIQDNSLLGGDLATQYLIDKGHTR 179

Query: 187 IGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLLDLPQPP 246
           I CI GP +      RL+GY  A++R G+ +   Y   GDF F  G  AM+QLL  P  P
Sbjct: 180 IACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTGDFEFNGGFDAMRQLLSHPLRP 239

Query: 247 TAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGRE 306
            AVF  +D MA+G      +  L+VP+D+++IG+D+I+L  F  PPLTTI QP+ E+G  
Sbjct: 240 QAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDIELASFMTPPLTTIHQPKDELGEL 299

Query: 307 AMLLLLDQM 315
           A+ +L+ ++
Sbjct: 300 AIDVLIHRI 308