Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho (NCBI) from Escherichia coli BW25113

Subject, 477 a.a., transcription termination factor Rho from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  563 bits (1452), Expect = e-165
 Identities = 276/416 (66%), Positives = 344/416 (82%)

Query: 1   MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD 60
           + L EL     ++L+   E + +EN + +RKQD++FAILK  A    +I  DGVLEIL D
Sbjct: 60  ITLAELNEKTPADLVAFAEQLEVENASNLRKQDLLFAILKALADEEVEIIADGVLEILPD 119

Query: 61  GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN 120
           GFGFLRS+D++YL GPDD+YVSPSQIRRF LR+GDT+ G +R P+EGERYFALLKV+ +N
Sbjct: 120 GFGFLRSSDANYLPGPDDVYVSPSQIRRFGLRSGDTVHGAVRAPREGERYFALLKVDTIN 179

Query: 121 FDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP 180
            + PE  + K+LF+NLTPL+   RL ME  + + +D + RV+D+ +P+G+GQR LIVAPP
Sbjct: 180 LEDPEAVKTKVLFDNLTPLYPEERLHMEIQDPTLKDRSGRVIDIVAPLGKGQRCLIVAPP 239

Query: 181 KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV 240
           + GKT++LQNIA+SI  NHP+  L+VLLIDERPEEVT+MQR VKGEVVASTFDEPA+RHV
Sbjct: 240 RVGKTVMLQNIAKSIERNHPEVFLIVLLIDERPEEVTDMQRTVKGEVVASTFDEPATRHV 299

Query: 241 QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF 300
            VAEMVIEKAKRLVEHKKDV+ILLDSITRL RAYN  VP+SGKVLTGGVDANAL RPKRF
Sbjct: 300 AVAEMVIEKAKRLVEHKKDVVILLDSITRLGRAYNATVPSSGKVLTGGVDANALQRPKRF 359

Query: 301 FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY 360
           FGAARNVE+GGSLTIIATALIDTGS+MDEVI+EEFKGTGN E+ L RK+A+KR+FPAID 
Sbjct: 360 FGAARNVEQGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIFPAIDV 419

Query: 361 NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMM 416
            +SGTRKE+L+T +++L K ++LR+I++PMG  DA+EFL++KL  +K N DFF+ M
Sbjct: 420 LKSGTRKEDLITPKDQLAKTYVLRRILNPMGPQDAIEFLLDKLRQSKNNSDFFQSM 475