Pairwise Alignments

Query, 421 a.a., ATP-dependent RNA helicase (NCBI) from Escherichia coli BW25113

Subject, 487 a.a., ATP-dependent RNA helicase RhlB from Pseudomonas sp. RS175

 Score =  322 bits (825), Expect = 2e-92
 Identities = 175/394 (44%), Positives = 245/394 (62%), Gaps = 6/394 (1%)

Query: 10  KFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFH 69
           +F DF L P+++ A++  GF  CTPIQA  L  TLAG+D  G+AQTGTGKT AFL S   
Sbjct: 99  RFHDFKLAPELMHAIQDLGFPYCTPIQAQVLGYTLAGKDAIGRAQTGTGKTAAFLISIIT 158

Query: 70  YLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLK 129
            LL  P   +R + +PRALI+APTREL VQI  DA  L + TGL +    GG  +DKQLK
Sbjct: 159 QLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQLK 218

Query: 130 VLESG-VDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPP 188
            LE+   DIL+ T GRL+D+ ++  ++L  ++V+VLDEADRM D+GFI  +R + R+ PP
Sbjct: 219 HLEARHCDILVATPGRLLDFNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPP 278

Query: 189 ANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQ 248
            ++R  +LFSAT +  V  LA +   +   +E+E E      +++ ++  +  +K +LL 
Sbjct: 279 KSERQTLLFSATFTDDVMNLAKQWTTDPAIVEIEAENVASENVEQHIYAVAGADKYKLLY 338

Query: 249 TLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLD 308
            LI +   +R ++FAN K     I   L  DG     L+GDV Q KR++ L+ F  G + 
Sbjct: 339 NLINDNGWERVMVFANRKDEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIR 398

Query: 309 ILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNL 368
           +LVATDVA RG+HI  ++HV N+ LP+  +DYVHRIGRTGRAGA G SIS A E+ +  L
Sbjct: 399 VLVATDVAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGAEGVSISFAGEDDSYQL 458

Query: 369 PAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRP 402
           P+IE  +G      K + +   T L +P+   RP
Sbjct: 459 PSIEALLGR-----KISCEMPPTHLLRPVERKRP 487