Pairwise Alignments

Query, 421 a.a., ATP-dependent RNA helicase (NCBI) from Escherichia coli BW25113

Subject, 483 a.a., DEAD/DEAH box helicase from Paraburkholderia sabiae LMG 24235

 Score =  273 bits (699), Expect = 6e-78
 Identities = 162/415 (39%), Positives = 233/415 (56%), Gaps = 10/415 (2%)

Query: 7   TEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTS 66
           T   F  F LH  +++A+ ++G+   TPIQA A+P+ L GRDV G AQTGTGKT +F   
Sbjct: 9   TNATFDQFGLHGDILKAIAEQGYTTPTPIQAQAIPVVLGGRDVMGAAQTGTGKTASFSLP 68

Query: 67  TFHYLLSHPAIADRKVNQP-RALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYD 125
               LL     +      P RALI+ PTRELA Q+ A+ +  A+ T L+  + +GG   +
Sbjct: 69  IIQRLLPLANTSASPARHPVRALILTPTRELADQVAANVQSYAKHTALRSTVVFGGVDMN 128

Query: 126 KQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185
            Q   L  GV+ILI T GRL+D+ +Q   NLG +Q++VLDEADRM D+GF+ D++ +   
Sbjct: 129 PQSAELRRGVEILIATPGRLLDHVQQKTANLGQVQLLVLDEADRMLDMGFLPDLQRILNL 188

Query: 186 MPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMR 245
           +P  ++R  +LFSAT S  +++LA   + N + IEV     T   + + ++  +  +K  
Sbjct: 189 LP--SERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNSTATNVTQIVYEVAEGDKTG 246

Query: 246 LLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRG 305
            +  LI E    + I+F N+K     +   L  DG     + GD +Q +R++ LD F RG
Sbjct: 247 AVVQLIRERSLKQVIVFCNSKIGASRLARQLERDGVVATAIHGDRSQNERMQALDAFKRG 306

Query: 306 DLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYA 365
           +++ LVATDVAARGL I  +  V N+DLP + EDYVHRIGRTGRAGASG ++SL      
Sbjct: 307 EIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSLFSPNER 366

Query: 366 LNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRS 420
             L  IE  I   + V +   D        P+R      G+   R     +RRR+
Sbjct: 367 KQLADIEKLIKRPLEVQRLTVDT-------PVRHHHDERGSRRERDDRGGSRRRT 414