Pairwise Alignments

Query, 475 a.a., predicted multidrug or homocysteine efflux system (NCBI) from Escherichia coli BW25113

Subject, 471 a.a., multidrug transporter subunit MdtD from Serratia liquefaciens MT49

 Score =  710 bits (1833), Expect = 0.0
 Identities = 357/463 (77%), Positives = 406/463 (87%)

Query: 4   KKKRSMAGLPWIAAMAFFMQALDATILNTALPAIAHSLNRSPLAMQSAIISYTLTVAMLI 63
           K  RSMAGLPWIAAMAFFMQALDATILNTALPAIA SL RSPLAMQSA+ISYTLTVAMLI
Sbjct: 3   KSARSMAGLPWIAAMAFFMQALDATILNTALPAIAQSLERSPLAMQSAVISYTLTVAMLI 62

Query: 64  PVSGWLADRFGTRRIFTLAVSLFTLGSLACALSNSLPQLVVFRVIQGIGGAMMMPVARLA 123
           PVSGWLADRFGTRR+F  AVSLFTLGSL CALS +L  LV  RVIQG+GGAMMMPVARLA
Sbjct: 63  PVSGWLADRFGTRRVFIFAVSLFTLGSLLCALSPTLSVLVTSRVIQGVGGAMMMPVARLA 122

Query: 124 LLRAYPRNELLPVLNFVAMPGLVGPILGPVLGGVLVTWATWHWIFLINIPIGIAGLLYAR 183
           LLRAYPR+ELLPVLNFV MPGLVGPI+GP+LGG LVT+ATWHWIFLINIPIG+ G+ YAR
Sbjct: 123 LLRAYPRSELLPVLNFVTMPGLVGPIMGPMLGGWLVTYATWHWIFLINIPIGLLGIFYAR 182

Query: 184 KHMPNFTTARRRFDITGFLLFGLSLVLFSSGIELFGEKIVASWIALTVIVTSIGLLLLYI 243
           K+MP+FTT +RRFD  GF+LFGLSLVL S+G+ELFGE+++AS+I+L ++++ + +L  YI
Sbjct: 183 KYMPDFTTPKRRFDFLGFMLFGLSLVLVSTGLELFGEQVLASYISLGILLSGVVMLFGYI 242

Query: 244 LHARRTPNPLISLDLFKTRTFSIGIVGNIATRLGTGCVPFLMPLMLQVGFGYQAFIAGCM 303
            HARR P PLI LDLF+TRTFS+GI GN+A+RLGTGCVPFLMPLMLQVGFGY A IAGCM
Sbjct: 243 AHARRHPQPLIGLDLFQTRTFSVGIAGNVASRLGTGCVPFLMPLMLQVGFGYSAIIAGCM 302

Query: 304 MAPTALGSIIAKSMVTQVLRRLGYRHTLVGITVIIGLMIAQFSLQSPAMAIWMLILPLFI 363
           MAPTA+GS++AKS VTQVLR  GYR TLVGIT+IIG++IAQF+LQSP M +W++ILPLF+
Sbjct: 303 MAPTAIGSLMAKSTVTQVLRWFGYRKTLVGITLIIGVLIAQFALQSPGMPLWLMILPLFV 362

Query: 364 LGMAMSTQFTAMNTITLADLTDDNASSGNSVLAVTQQLSISLGVAVSAAVLRVYEGMEGT 423
           LGMAMSTQFTAMNTI+LADL D NASSGNSVLAVTQQLSIS GVA+SAAVLR YE M   
Sbjct: 363 LGMAMSTQFTAMNTISLADLNDANASSGNSVLAVTQQLSISFGVAISAAVLRFYESMSLG 422

Query: 424 TTVEQFHYTFITMGIITVASAAMFMLLKTTDGNNLIKRQRKSK 466
           T V+ FHYTFITMGI+T+ASA +FMLLK  DG NLI  +   K
Sbjct: 423 TMVDHFHYTFITMGIVTLASAFVFMLLKRKDGRNLISGRDSKK 465