Pairwise Alignments

Query, 391 a.a., multidrug efflux system protein (NCBI) from Escherichia coli BW25113

Subject, 399 a.a., multidrug effflux MFS transporter from Pectobacterium carotovorum WPP14

 Score =  184 bits (466), Expect = 5e-51
 Identities = 127/401 (31%), Positives = 198/401 (49%), Gaps = 23/401 (5%)

Query: 1   MSRFLICSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGK 60
           M RF++   ALVLL P GID+YL  +P IA  LN+ E+ +    ++++  M    L AG 
Sbjct: 1   MQRFVLILLALVLLGPLGIDIYLPLIPAIAVALNSPESLIQSTVALFILIMGLGQLLAGP 60

Query: 61  VADRSGRKPVAIPGAALFIIASVFCSLAETSTLFLAGRFLQGLGAGCCYVVAFAILRDTL 120
           + D+ GR+P+A+ G  +++I +V  +LA ++TLF+  R  QGL   C  V  F+ +RD L
Sbjct: 61  LVDKYGRRPMALAGVIIYLIGAVMAALATSATLFILSRLFQGLAVCCTAVAIFSSVRDKL 120

Query: 121 DDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFWAMAMMGIAVLMLSLFILKE 180
           +    A+    LNG   I+P LAP+ G L+     W++ FW +A   I VL L +  L E
Sbjct: 121 NGDDAARTYGFLNGTLNIVPALAPLFGGLLAEALGWRAPFWFLAGYSILVLALVIRFLPE 180

Query: 181 TRP--AAPAASDKPRENSESLLNRFFLSRVVITTLSVSVILTFVNTSPVLLMEIMGFERG 238
           TRP    P      R+ +  L +R FL    +   ++ + LT+V  SP++LM        
Sbjct: 181 TRPDSTLPVHGLPLRQYARLLSDRHFLGFASVNAGAMGMALTYVTFSPLVLMNEAQLTPL 240

Query: 239 EYATIMALTAGVSMTVS-FSTPFALGIFKPRTLMITSQV-----LFLAAGITL---AVSP 289
           E++    +     M VS F+      + +PR L I S +     L L +G+ L   A+  
Sbjct: 241 EFSIAFGVNGFWIMLVSFFANRIIRKVGRPRCLAIGSLLMGAGFLSLLSGVVLLPEAMQN 300

Query: 290 SHAVSLFGITLICAGFSVGFGVAMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVV 349
           +    +  + L CAG +   G + S AL P+S  AG+AS+ +G  Q+ G +         
Sbjct: 301 TWPTYMLPVALACAGLAFLIGPSTSYALEPYSNEAGIASAMVGFVQMAGGA--------- 351

Query: 350 GIGAWNMLIGILIACSIVSLLLIMFVAPGRPVAAHEEIHHH 390
              A  ++   L   S +SL L+M  A    + A     HH
Sbjct: 352 ---ALGLIAMALPLPSKISLALVMLCAALLAIRARLLTRHH 389