Pairwise Alignments

Query, 391 a.a., multidrug efflux system protein (NCBI) from Escherichia coli BW25113

Subject, 417 a.a., multidrug effflux MFS transporter from Dickeya dadantii 3937

 Score =  130 bits (326), Expect = 9e-35
 Identities = 110/399 (27%), Positives = 188/399 (47%), Gaps = 31/399 (7%)

Query: 1   MSRFLICSFALVLLYPA-GIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAG 59
           M+  LI   AL+    A  IDMYL  +P +A D  AS  ++    SV+L G+A      G
Sbjct: 12  MTYSLILLLALLTALDAMAIDMYLPAMPALAMDFGASSGKVQQTLSVFLVGLALGQGICG 71

Query: 60  KVADRSGRKPVAIPGAALFIIASVFCSLAETSTLFLAGRFLQGLGAGCCYVVAFAILRDT 119
            + DR GR+   + G  +FI  SV  +L+ +    +  RFLQ LGA    V   AI+ D 
Sbjct: 72  PLLDRYGRRIPLLAGLVIFIGGSVMAALSSSIEWLMLARFLQALGASAGLVAPRAIVADL 131

Query: 120 LDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFWAMAMMGIAVLMLSL---- 175
                 A++ SLL  +  I P+LAP+LG  ++    W+ +FW +A +G A L+  +    
Sbjct: 132 YSVAESARIFSLLMQVMMIAPILAPLLGGYLLAHGEWRLVFWVLAGLGGAGLIWGIRTIP 191

Query: 176 -FILKETRPAAPAASDKPRENSESLLNRFFLSRVVITTLSVSVI----LTFVNTSPVLLM 230
             + +E R A+ A +  P     + + +      +  TL+  VI      ++++S  +  
Sbjct: 192 ESLSEEKRLASRAGNLSPGNIVRAYVRQLGYGVFMAYTLAGGVIFGSLFVYISSSSFVFT 251

Query: 231 EIMGFERGEYATIMALTAGVSMTV--SFSTPFALGIFKPRTLMITSQVLFLAAGITLAV- 287
           +  G    +++ I A  A VS+ +    ST         + +M+   V+ + AG+ L+V 
Sbjct: 252 QSFGLTPAQFSYIFAANA-VSLVIGGQISTTLLRRRVGEQRIMMFGIVIHILAGLVLSVL 310

Query: 288 SPSHAVSLFGITLICA----GFSVGFGVAMSQALGPFSLRAGVASSTLGIAQVCGSSLWI 343
             S  + L+G  L+ A       + FG   +  +     +AGVAS+ +G+ Q        
Sbjct: 311 ILSGWIGLWGYLLLLATAIGALGLVFGNLTALTMAYAGRQAGVASALMGMLQYL------ 364

Query: 344 WLAAVVGIGAWNMLIG------ILIACSIVSLLLIMFVA 376
            +AA+VG  A  +L G      +++ C +V++LL +  +
Sbjct: 365 -IAALVGYCASQVLQGPVVLPVVIVLCGVVAMLLCIMAS 402