Pairwise Alignments

Query, 548 a.a., inner membrane protein translocase component YidC (NCBI) from Escherichia coli BW25113

Subject, 560 a.a., membrane protein insertase from Pseudomonas simiae WCS417

 Score =  475 bits (1222), Expect = e-138
 Identities = 255/559 (45%), Positives = 350/559 (62%), Gaps = 30/559 (5%)

Query: 1   MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAG---------SAADQG 51
           MD +R +L++AL  VS+++   W QD        Q   T   A           ++A   
Sbjct: 1   MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVATNQAAPAIPDTPLGNNASASAD 60

Query: 52  VP-ASGQGK------------LISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-PF 97
           VP A+G+              LI VKTDVLDL I+ +GGD+ Q  LP YP+  +    PF
Sbjct: 61  VPSANGETSAPLETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPF 120

Query: 98  QLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAA 157
           QL +   +  Y AQSGLTG +GPD  A G RP+Y+ E+  Y LA+GQN+L V + ++   
Sbjct: 121 QLFDNGGERTYLAQSGLTGTNGPDARATG-RPVYSTEQKTYQLADGQNQLNVDLKFS-LD 178

Query: 158 GNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHT 217
           G  + K F   RG Y + V Y + N G+KP   + F QLK+  +  P   T +      T
Sbjct: 179 GVNYIKRFSFTRGLYDLKVTYLIDNEGDKPWSGNLFAQLKRDASSDPSSSTATGTA---T 235

Query: 218 FRGAAYSTPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTA 277
           + GAA  T  E Y+K     I D  +L  + +GGWVA LQ YF TAWIP     N   T 
Sbjct: 236 YLGAALWTSSEPYKKVSMKDI-DKGSLKETVQGGWVAWLQHYFVTAWIPSKGEANLVQTR 294

Query: 278 NLGNGIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVAPHLDLTVDYGWLWFIS 337
               G   IG+    + V PG     ++TL+ GP+ Q  +  ++P L+LTVDYG+LWFI+
Sbjct: 295 KDSQGNYIIGFTGPALTVAPGAKAETSATLYAGPKSQAVLKELSPGLELTVDYGFLWFIA 354

Query: 338 QPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERL 397
           QP+F LL+ IHS VGNWGFSII +T +++GI +PL+ A Y SMA+MR + PK+ A++E+ 
Sbjct: 355 QPIFWLLQHIHSIVGNWGFSIIFLTMLIKGIFFPLSAASYKSMARMRAVAPKLAALKEQH 414

Query: 398 GDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHD 457
           GDD+Q++SQ MM LYK EK+NPLGGC P+L+QMP+FL+LY++L+ SVE+RQAPF LWI D
Sbjct: 415 GDDRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFMLWITD 474

Query: 458 LSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPSGLVLYY 517
           LS +DP++ILPI+MG TMF  Q+++PT   DPMQ K+M  MP+IFT FFLWFP+GLVLY+
Sbjct: 475 LSIKDPFFILPIIMGATMFIQQRLNPTP-PDPMQAKVMKMMPIIFTFFFLWFPAGLVLYW 533

Query: 518 IVSNLVTIIQQQLIYRGLE 536
           +V+N+++I QQ  I R +E
Sbjct: 534 VVNNVLSISQQWYITRKIE 552