Pairwise Alignments

Query, 548 a.a., inner membrane protein translocase component YidC (NCBI) from Escherichia coli BW25113

Subject, 568 a.a., Inner membrane protein translocase component YidC, long form from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  349 bits (895), Expect = e-100
 Identities = 199/564 (35%), Positives = 309/564 (54%), Gaps = 41/564 (7%)

Query: 2   DSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAAGSAADQ-------GVPA 54
           D +R++L +       +IW  W+     +P     +    TA  ++  Q       GVP+
Sbjct: 3   DIRRSILWVVFGLSMVLIWDKWQIHNGHKPTFFPGSAPAVTAPAASTSQPAGSTSAGVPS 62

Query: 55  SGQGKLI-----------------SVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQ-- 95
           S Q                      V TD+  L  N+ GG +  A L  + +    ++  
Sbjct: 63  STQATAAPGVETPAAAPGAVAQRHEVTTDLFKLVFNSEGGSLIGAELLKHAEATGQSKDK 122

Query: 96  ---PFQLLETSPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMT 152
              PF LL    + IY AQ+GL G + P +    P  L     +   LA+GQNELQV   
Sbjct: 123 TERPFTLLAQGGEHIYVAQTGLIGGNFPTHKT--PMTLVG---NPTSLADGQNELQVRFE 177

Query: 153 YTDAAGNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSN 212
             +  G    KT+   RG Y + V + V+N G + +    + QL +  +        S  
Sbjct: 178 SAEVGGVKLIKTYTFTRGRYDIGVQHEVKNVGGQAVTPQLYQQLVRDGS-----KLSSET 232

Query: 213 FALHTFRGAAYSTPDEKYEKYKFDTIA-DNENLNISSKGGWVAMLQQYFATAWIPHNDGT 271
               TF G A  T ++KY+K +F  I  D      ++  G+VAM+Q YFA+AW+      
Sbjct: 233 PFYSTFTGPAVYTNEKKYQKIEFANIEKDKAEFVKTASDGYVAMVQHYFASAWLLGEGVA 292

Query: 272 NNFYTANLGNGIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVAPHLDLTVDYG 331
              +   + N + A+G  +    ++PGQ+ +  S L++GP+ +  +  +AP L+L  DYG
Sbjct: 293 RENFARKIDNNLFAVGSITALTAIEPGQSQSQQSRLFLGPQEEKVLETIAPGLELVKDYG 352

Query: 332 WLWFISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQ 391
           WL  +++PL+ LL+ IH +V NWG++I+++  +++   Y L  + Y SMAKM+ + P+I 
Sbjct: 353 WLTILAKPLYWLLEKIHGYVANWGWAIVLLVVLIKAAFYWLNASAYRSMAKMKKINPRIM 412

Query: 392 AMRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPF 451
            MRERL  + Q++ QEMM +Y+ EKVNPLGGCFP+LIQ+P+F+ALY++L+ SVE+R AP+
Sbjct: 413 EMRERLKGNPQQMQQEMMKIYREEKVNPLGGCFPILIQIPVFIALYWVLLSSVEMRNAPW 472

Query: 452 ALWIHDLSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLWFPS 511
             WI DLS+ DPY+ILP++M VT      ++P    DP+Q K+M  MP++F+V F +FPS
Sbjct: 473 MAWITDLSSPDPYFILPLVMAVTTLIQTALNPLP-PDPLQAKLMWLMPLMFSVMFFFFPS 531

Query: 512 GLVLYYIVSNLVTIIQQQLIYRGL 535
           GLVLY+I +N++TI QQ +I R +
Sbjct: 532 GLVLYWITNNVLTIAQQAVINRSM 555