Pairwise Alignments

Query, 548 a.a., inner membrane protein translocase component YidC (NCBI) from Escherichia coli BW25113

Subject, 535 a.a., membrane protein insertase, YidC/Oxa1 family, N-terminal domain from Kangiella aquimarina DSM 16071

 Score =  452 bits (1162), Expect = e-131
 Identities = 235/543 (43%), Positives = 338/543 (62%), Gaps = 17/543 (3%)

Query: 1   MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQ--TTTTAAGSAADQGVPASGQG 58
           M+S R   ++     SF+++QAW++D  PQP+ +   Q   + T A S  D         
Sbjct: 1   MESMRGFFILGFAICSFLLYQAWQKDYGPQPEQEVNEQFGQSNTVANSKVDTN------- 53

Query: 59  KLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSPQFIYQAQSGLTGRD 118
            LI V TDV  + I+  GGDV  A L  Y KELN+ Q   +L      +YQA+S L G  
Sbjct: 54  NLIEVVTDVFKIKIDRVGGDVVYAELNDYNKELNNEQEKAVLFDYRDRVYQAKSALLGTG 113

Query: 119 GPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNTFTKTFVLKRGDYAVNVNY 178
            PDN    PR  Y  ++ +Y L +GQ+EL +P+T+ +  G  FTKTF   R DY + V Y
Sbjct: 114 APDNQL--PRATYQTKQSSYSLQDGQDELIIPLTWANDEGVLFTKTFTFNRNDYEIGVQY 171

Query: 179 NVQNAGEKPLEISSFGQLKQSITLPPHLDTGSSNFALHTFRGAAYSTPDEKYEKYKFDTI 238
            V N        +   +L +    P  L+  SS F +  F G AYS  + KYEK  F+ +
Sbjct: 172 KVNNQSSNDRTYNFVAELIRD-QKPTGLEEKSS-FGMSPFLGVAYSPEERKYEKISFEDL 229

Query: 239 ADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYTANLGNGIAAIGYKSQPVLVQPG 298
            + E +N++ +GGW+  LQ YF +AWIP         +    N    I +  QP +  P 
Sbjct: 230 -EEEPINVTRQGGWIGYLQHYFISAWIPEQQEKIKVTSTVKSNQDTIIRF-IQPTVAVPA 287

Query: 299 Q-TGAMNSTLWVGPEIQDKMAAVAPHLDLTVDYGWLWFISQPLFKLLKWIHSFVGNWGFS 357
           Q    +N+TL+VGP+I  ++ A AP L+ ++D  W+W+I  PL+KL+++ +SFV NWG +
Sbjct: 288 QGEKVINATLYVGPKILKRLEAAAPGLEKSLDLSWVWWIGLPLYKLMQFFYSFVANWGVA 347

Query: 358 IIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKIQAMRERLGDDKQRISQEMMALYKAEKV 417
           II++T +V+ ++YPL+ AQY SMA MR L PK+Q ++ER G+DKQR+ QEMM +YK E  
Sbjct: 348 IILVTLVVKTLLYPLSAAQYRSMANMRKLAPKMQQLKERYGEDKQRMQQEMMKMYKEEGA 407

Query: 418 NPLGGCFPLLIQMPIFLALYYMLMGSVELRQAPFALWIHDLSAQDPYYILPILMGVTMFF 477
           NP GGC P+L+Q PIF+ALYY+L  +VELR APF  WI DLS  DPY++LP+LMG +M+ 
Sbjct: 408 NPFGGCLPMLLQFPIFIALYYVLFEAVELRHAPFFGWIQDLSVADPYFVLPLLMGGSMWL 467

Query: 478 IQKMSPTTVT-DPMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLE 536
           +QK+ P + T DPMQQKIM+++PV+FTVF L+FP+GLVLY++ +NL+++ QQQ I + +E
Sbjct: 468 MQKLQPQSPTMDPMQQKIMSYLPVVFTVFMLFFPAGLVLYWLCNNLISVAQQQYITKKIE 527

Query: 537 KRG 539
           K+G
Sbjct: 528 KQG 530