Pairwise Alignments

Query, 394 a.a., 2-module integral membrane pump; multidrug resistance (VIMSS) from Escherichia coli BW25113

Subject, 387 a.a., Bcr/CflA family drug resistance efflux transporter from Escherichia coli ECRC102

 Score =  142 bits (357), Expect = 2e-38
 Identities = 105/392 (26%), Positives = 192/392 (48%), Gaps = 27/392 (6%)

Query: 11  LMLVLLVAVGQMAQTIYIPAIADMARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRV 70
           L+L LL  +G M   +Y+PA+ +M+  L       Q  + A L+  GV QL +GP+SD++
Sbjct: 10  LILGLLAGIGPMCTDLYLPALPEMSEQLAATTTITQLTLTASLIGLGVGQLLFGPLSDKI 69

Query: 71  GRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQL 130
           GR+  +++ + +F++++++  TT+++  L+    +QG+    G V++R++ RD Y+   L
Sbjct: 70  GRKRPLILSLLLFIVSSILCATTNNIYWLVVWRFIQGIAGAGGSVLSRSIARDKYQGVTL 129

Query: 131 RHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVD 190
               +LL     ++P+L+P++GG + + ++WR  +  +  +   +      ++ ET P +
Sbjct: 130 TQFFALLMTVNGLAPVLSPVLGGYIVSTFDWRTLFWVMAEISTVLLLGCVLFINETLPEN 189

Query: 191 APRTRLLTSYKTLFGNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFI 250
              + LL + +++  N  F  + L+    LAG+ A+   S  ++    G S M  S++F 
Sbjct: 190 KRGSSLLLTGRSVVQNRRFMRFCLIQSFMLAGLFAYIGSSSFVLQKEFGFSPMQFSLVFG 249

Query: 251 LPIPAAFFGAWFAGRPNKRFS--TLMWQSVICCLLAGLLMWIPDWFGVMNVWTLL-VPAA 307
           L        +W   R  +R +  TL+   +I  +L  LL        V+  WT L +PA 
Sbjct: 250 LNGIGLIIASWIFSRLARRINAMTLLRGGLIAAILCALLT-------VLCAWTQLPIPAL 302

Query: 308 L-FFFGAGMLFPLATSGAMEPFPFL----AGTAGALVGGLQNIGSGVLASLSAMLPQTGQ 362
           +  FF       + T G  E    +    +GTA AL+G    +  G+ A LS        
Sbjct: 303 VALFFTIAFCSGIGTVGGAEAMSAVGTQESGTASALMGMSMFVFGGIAAPLS-------- 354

Query: 363 GSLGLLMTLMGLLIVLCW----LPLATRMSHQ 390
           G  G  +  M L I +C+    L   TR+ +Q
Sbjct: 355 GFGGETLLKMSLAITVCYTLAFLVALTRIDNQ 386