Pairwise Alignments

Query, 307 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

Subject, 314 a.a., putative amino-acid metabolite efflux pump from Pseudomonas sp. RS175

 Score = 74.3 bits (181), Expect = 3e-18
 Identities = 77/309 (24%), Positives = 130/309 (42%), Gaps = 32/309 (10%)

Query: 9   LNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRLIFAGLILLTLSFVHGDKIFSIINN 68
           LN+ +  ++WG + V  +  M  S + S      R   A + LL   F+   ++  +   
Sbjct: 18  LNLSMVTMIWGGTFVAGR--MLSSTLESLLAASLRFSLASIALLL--FLCLARVALVRPT 73

Query: 69  HKDAISLLIFSVVGALTVQLTFLLTIEKSNAATATVLQFLSPTII--VAWFSLVRKSRPG 126
            K A+ L +    G L   L F   ++   A+ A+++  L+P +I   +W+    K R G
Sbjct: 74  LKQALQLAVLGFFGILFYNLCFFQGLQYVQASRASLIVALNPAVIGLASWWLF--KERLG 131

Query: 127 ILVFCAILTSLVGTFLLVTHGNPTSLS-----------ISPAALFWGIASAFAAAFYTTY 175
                 I+  + G  L++   +P+SL            I    L WGI        Y+ +
Sbjct: 132 PSKVWGIVLCIGGAGLVIVSRDPSSLQSAAQGWMGDLLIFGCVLGWGI--------YSLF 183

Query: 176 PSTLIARYGTLPVVGWSMLIG-GLILLPFYARQGTNFVVNGSLI----LAFFYLVVIGTS 230
              L    G L  V WS+L+G G++ L   A           L     L+  YL V+G++
Sbjct: 184 SRNLNDSLGPLQTVTWSILLGTGMLWLACVAGGEARLEPLRGLDMRQWLSLLYLGVLGSA 243

Query: 231 LTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVILIS 290
           L +  + +G + IG  +  +     PL++ LL  LLL         +G  LIL+ + L +
Sbjct: 244 LAYIAWYEGIRRIGATRCGVFIALNPLTAVLLGALLLDERLGALMGVGAGLILTGIFLCN 303

Query: 291 MDSRRRARK 299
               R A+K
Sbjct: 304 KPLARSAQK 312