Pairwise Alignments

Query, 378 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

Subject, 392 a.a., Multidrug resistance efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  152 bits (384), Expect = 2e-41
 Identities = 104/393 (26%), Positives = 208/393 (52%), Gaps = 21/393 (5%)

Query: 1   MDLLIVLTYVALAWAVFKIFRI-PVNQWTLATAALGGVFLVSGLILLMNYNHPYTFTAQK 59
           M++L++L Y  + W +F  F++ P N  +     +  V  ++ LIL++N   P +   + 
Sbjct: 1   MEILLLLIYSGIVWLIFFKFKLLPWNTVSQVIVFIIPVVSIALLILILNIVAPSSHDVRV 60

Query: 60  AVIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRY-------QARVDRLQADLMT 112
               + + P+VTG+V +V  + N+ ++KG+ LF++DP+ +       +A++  L+A L++
Sbjct: 61  MNYNVEVVPRVTGLVVDVPVEPNEHVKKGDTLFRIDPLPFELEVKNIEAKLPGLEAKLVS 120

Query: 113 ATHNIKTLRAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFL 172
           A    + L +QLT +  +   ++ + D   K  ++  + +Q+     S+ D + A  N  
Sbjct: 121 AEAFDRELESQLTTSNNHIRVINTQIDLAVKRLEQTKELAQSGAG--SQFDYEQAETNLK 178

Query: 173 AQDALVKGSVAEQAQIQSQLDSMVN-GEQSQIVSLRAQLTE-------AKYNLEQTVIRA 224
             +A +  + +E++Q+  +L +  + GE +Q+   RA L +       AK+ L+QTV RA
Sbjct: 179 NLEAQLAVAESEKSQVIQRLSAQSDEGEFAQVSEARAALEQAKSDLAMAKWRLDQTVYRA 238

Query: 225 PSNGYVTQVLIRPGTYAAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNA 284
           P++G V  + +R G  A   P++PVM F+ E ++ +VA F QN L R++ G++AE+    
Sbjct: 239 PADGRVVNLQLRTGAMAVQFPIKPVMSFV-EDEQWVVALFAQNELRRVEKGNEAEIALRT 297

Query: 285 LPGQVFHGKLTSILPVVPGGSYQAQGVLQSLTVVPGTDGVLGT-IELDPNDDIDALPDGI 343
            P ++    +  I+     G   A G +     +   +G     + +D ++D+   P G 
Sbjct: 298 HPNRIIKCTVDHIVWANAQGQLTASGRIPDTKEMGHHEGRFAVRLTIDEDNDVFLAP-GA 356

Query: 344 YAQVAVYSDHFSHVSVMRKVLLRMTSWMHYLYL 376
             Q A+Y++H   + ++RKV++R+ + + +L L
Sbjct: 357 VGQGAIYTEHGKLIHLIRKVIIRVGTKIDWLIL 389