Pairwise Alignments

Query, 392 a.a., DNA-binding transcriptional activator, xylose-binding (NCBI) from Escherichia coli BW25113

Subject, 392 a.a., Xylose activator XylR (AraC family) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  729 bits (1883), Expect = 0.0
 Identities = 362/392 (92%), Positives = 374/392 (95%)

Query: 1   MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDKIKDWLGDGV 60
           MF KRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARID IK+WLGDGV
Sbjct: 1   MFDKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEEDFRARIDNIKEWLGDGV 60

Query: 61  IADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN 120
           IAD+DD  I Q LADVDVPIVGVGGSYHLAE+YP VHYIATDN+ALVESAFLHLKEKGVN
Sbjct: 61  IADYDDDDIAQLLADVDVPIVGVGGSYHLAENYPAVHYIATDNHALVESAFLHLKEKGVN 120

Query: 121 RFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT 180
           RFAFYGLP SS K WA EREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT
Sbjct: 121 RFAFYGLPNSSRKHWAAEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQT 180

Query: 181 LPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240
           LPPQTGIIAVTDARARH+LQ CEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR
Sbjct: 181 LPPQTGIIAVTDARARHVLQACEHLHIPVPEKLCVIGIDNEELTRYLSRVALSSVAQGAR 240

Query: 241 QMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRSTDYRSLTDPAVIQAMHYIRNHACK 300
           QMGYQAAKLLHRLL +EEMPLQRILVPPVRVI RRSTDYRSLTDPAVIQAMH+IRNHACK
Sbjct: 241 QMGYQAAKLLHRLLAREEMPLQRILVPPVRVIARRSTDYRSLTDPAVIQAMHFIRNHACK 300

Query: 301 GIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMC 360
           GIKV+QVLDAVGISRSNLEKRFKEEVGETIHA+IHAEKLEKARSLLISTTL+INEISQMC
Sbjct: 301 GIKVEQVLDAVGISRSNLEKRFKEEVGETIHALIHAEKLEKARSLLISTTLAINEISQMC 360

Query: 361 GYPSLQYFYSVFKKAYDTTPKEYRDVNSEVML 392
           GYPSLQYFYSVFKK Y TTPKEYRD +SE +L
Sbjct: 361 GYPSLQYFYSVFKKEYVTTPKEYRDQHSEALL 392