Pairwise Alignments

Query, 330 a.a., D-xylose transporter subunit (NCBI) from Escherichia coli BW25113

Subject, 333 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  391 bits (1004), Expect = e-113
 Identities = 198/327 (60%), Positives = 249/327 (76%), Gaps = 1/327 (0%)

Query: 4   KNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA 63
           K  L+    +LL     A +   KIG +IDDLRLERW +DRD FV  AE L AKVFVQSA
Sbjct: 5   KRTLIATALALLALPAMADSAHPKIGFSIDDLRLERWSRDRDYFVAAAEKLDAKVFVQSA 64

Query: 64  NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDF 123
           + NE+ Q+SQIEN+I+RGVDV+VI+P+N  VL+N V EAK+ GIKV++YDR+I +ADID 
Sbjct: 65  DANEQKQISQIENLISRGVDVIVIVPFNATVLTNAVAEAKKAGIKVVSYDRLILNADIDA 124

Query: 124 YISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKV 183
           YISFDNEKVGE+QA  ++   P+GNYFL+GG+P DNNAK+ R GQMKVL+P +D G IKV
Sbjct: 125 YISFDNEKVGEMQASGVLQAAPKGNYFLLGGAPTDNNAKVLREGQMKVLQPAIDKGDIKV 184

Query: 184 VGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISG 243
           VG QWV  W P  AL I+ENALT NNNKIDA+VASNDATAGGAIQAL+AQ L+GKV ISG
Sbjct: 185 VGQQWVKEWNPTEALSIVENALTRNNNKIDAIVASNDATAGGAIQALAAQKLAGKVPISG 244

Query: 244 QDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSR 303
           QDADLA IKR+  GTQTMTVYKP+ L+A+ AA+++V+L   ++P   +  +NG K V + 
Sbjct: 245 QDADLAAIKRVIDGTQTMTVYKPLKLIASEAAKLSVQLARNEKPTYSSQYDNGSKKVDTI 304

Query: 304 LLTPIDVNKNNIKDTVIKDGFHKESEL 330
           LLTP  + K NI D + KDGF+ + ++
Sbjct: 305 LLTPTPLTKANI-DLLEKDGFYTKEQI 330