Pairwise Alignments

Query, 339 a.a., dipeptide ABC transporter, membrane subunit (DppB) (from data) from Escherichia coli BW25113

Subject, 314 a.a., ABC transporter permease from Paraburkholderia sabiae LMG 24235

 Score =  270 bits (691), Expect = 3e-77
 Identities = 153/340 (45%), Positives = 212/340 (62%), Gaps = 32/340 (9%)

Query: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELG--- 57
           ML+ I  R+ + +PT I +++L F    ++PGDPV+ MAGE     ++ AQ++A L    
Sbjct: 1   MLRIIANRMLVAVPTLILVSMLIFGLQKLLPGDPVLAMAGE-----DQDAQVIATLRVKY 55

Query: 58  -LDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLELGVCAMIFATAVGIP 116
            LD+P+  QY  ++  V HGDLG S+++ +PV      +   T++L V AMI A  +GIP
Sbjct: 56  HLDQPVPTQYALWVRDVAHGDLGSSLRTDVPVRSLIAQKLPVTIQLAVMAMILAIGIGIP 115

Query: 117 VGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHWNLTPVSGRVSDMVFLD 176
            GV++A  RG   DH A   AL+G S+P FW G+MLI +VSV W+L P SG V       
Sbjct: 116 AGVISAASRGGPLDHAANIFALSGMSIPNFWLGIMLIFIVSVRWHLLPSSGYVPP----- 170

Query: 177 DSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGEDY 236
                           GED  F  ++  M++PA VLG    A ++R TRS+ML VL  DY
Sbjct: 171 ----------------GED--FWLSIKTMLMPAFVLGAALGAQLMRHTRSAMLGVLRTDY 212

Query: 237 IRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLID 296
           IRTARAKGL R  V++ HA RNA++P+VTV+ L  G LLAGA+LTE +F+ PG G+ ++D
Sbjct: 213 IRTARAKGLLRGAVVVKHAFRNALIPIVTVLALLFGELLAGAVLTEQVFTIPGFGKLVVD 272

Query: 297 ALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336
           A+  RDYPVVQG VL+ A   I+VNL  D+LY ++NPR+R
Sbjct: 273 AVFNRDYPVVQGVVLVTALAFIVVNLCADVLYILLNPRLR 312