Pairwise Alignments

Query, 334 a.a., dipeptide transporter (NCBI) from Escherichia coli BW25113

Subject, 334 a.a., murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF from Dickeya dianthicola 67-19

 Score =  301 bits (772), Expect = 1e-86
 Identities = 156/322 (48%), Positives = 222/322 (68%), Gaps = 6/322 (1%)

Query: 12  LLQAIDLKKHYPV---KKGMFAPERLVKALDGVSFNLERGKTLAVVGESGCGKSTLGRLL 68
           LL+  +LK H+ +   K+  + P + +KA+DGV+  L  G+TL VVGESGCGKSTL R +
Sbjct: 10  LLEVDELKVHFDIRDDKQWFWQPAKKLKAVDGVTLRLYEGETLGVVGESGCGKSTLARAI 69

Query: 69  TMIEMPTGGELYYQGQDLLKHDPQAQKLRRQKIQIVFQNPYGSLNPRKKVGQILEEPL-L 127
             +   T G + + G+DLL       +  R  IQ++FQ+P  SLNPR  +G+I+ EPL  
Sbjct: 70  IGLVKATSGRISWLGKDLLGMSDTEWRNVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRT 129

Query: 128 INTSLSKEQRREKALSMMAKVGLKTEHYDRYPHMFSGGQRQRIAIARGLMLDPDVVIADE 187
            +  + +++ +++  +MM KVGL     +RYPH FSGGQ QRI IAR L+L+P ++I DE
Sbjct: 130 YHPDMPRQEVKDRVKTMMMKVGLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIICDE 189

Query: 188 PVSALDVSVRAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTKD 247
           PVSALDVS++AQV+NL+  LQ+E+GLS +FI+HDLSVV+HI+D V+VMYLG  VE GT D
Sbjct: 190 PVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLSVVKHISDRVLVMYLGHAVELGTYD 249

Query: 248 QIFNNPRHPYTQALLSATPRLNPD-DRRERIK-LSGELPSPLNPPPGCAFNARCRRRFGP 305
           ++++NP+HPYT+AL+SA P  +PD +R ++I+ L G+LPSP+NPP GC F  RC      
Sbjct: 250 ELYHNPQHPYTRALMSAVPIPDPDKERNKQIQLLEGDLPSPINPPSGCVFCTRCPVVGPE 309

Query: 306 CTQLQPQLKDYGGQLVACFAVD 327
           CT+ +P L+      V+C  VD
Sbjct: 310 CTKTRPVLEGSFRHAVSCLKVD 331