Pairwise Alignments

Query, 662 a.a., predicted diguanylate cyclase (RefSeq) from Escherichia coli BW25113

Subject, 994 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  226 bits (577), Expect = 3e-63
 Identities = 154/424 (36%), Positives = 225/424 (53%), Gaps = 19/424 (4%)

Query: 247 VSDLPNKALLMEMLEQVVARK----QTTALMIITCETLRDTAGVLKEAQREILLLTLVEK 302
           ++DLPN+ LL++ L+Q +A      Q  ALM I  +  +     L     + LL  +  +
Sbjct: 561 LTDLPNRQLLLDRLQQALAASARSGQHGALMFIDLDNFKILNDTLGHHMGDQLLQKVAAR 620

Query: 303 LKSVLSPRMILAQISGYDFAVIANGVQEP-----WHAITLGQQVLTIMSERLPIERIQLR 357
           L   +    ++A++ G +F V+ + +        + A  L ++VL  + E   +   Q  
Sbjct: 621 LTRSVRKTDMVARLGGDEFVVMVDDLSTDPDAAAFKATALAEKVLNTLREPFQLTGHQHF 680

Query: 358 PHCSIGVAMFYGDLT-AEQLYSRAISAAFTARHKGKNQIQFFDPQQMEAAQKRLTEESDI 416
              SIGV  F G  +   +L  +A  A + A+  G+N + FFDP          T  SD+
Sbjct: 681 ATPSIGVTSFNGQQSDVGELLKQADLAMYQAKSLGRNTLCFFDPNMAATVSANATVSSDL 740

Query: 417 LNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQQPDGSWDLPDGLIDRIECCGLMVTVG 476
             AL   QF +  QPQV+   G +   E L+R Q P      P   I   E  GL++ +G
Sbjct: 741 RVALSEQQFVVHYQPQVDRV-GVITGVEALVRWQHPQRGLIFPADFIPVAEDTGLILPLG 799

Query: 477 HWVLEESCRLLAAWQERG--IMLPLSVNLSALQLMHPNMVADMLELLTRYRIQPGTLILE 534
            WVLE+SC  LAAW +R     L ++VN+S  Q  HP+ V  ++  +TR  I+P  L LE
Sbjct: 800 QWVLEKSCEQLAAWADRPQTANLSIAVNVSVRQFRHPDFVDMVMAAITRTGIRPHKLKLE 859

Query: 535 VTESRRIDDPHAAVAILRPLRNAGVRVALDDFGMGYAGLRQLQHMKSLPIDVLKIDKMFV 594
           +TES   D     +  +  L+  GV ++LDDFG+GY+ L  L   K LP+D LKIDK FV
Sbjct: 860 LTESLLADRMEITIDKMGMLKALGVTLSLDDFGVGYSSLSVL---KRLPLDQLKIDKGFV 916

Query: 595 EGL---PGDSSMIAAIIMLAQSLNLQMIAEGVETEAQRDWLAKAGVGIAQGFLFARPLPI 651
             +   P D+++  AII LAQSL+LQ++AEGVET+ QRD+LA  G    QG LFA+PLPI
Sbjct: 917 ADVLTDPNDAAISRAIIALAQSLSLQVVAEGVETQEQRDFLAYQGCDQFQGHLFAKPLPI 976

Query: 652 EIFE 655
           E  +
Sbjct: 977 EALD 980