Pairwise Alignments

Query, 254 a.a., nickel transporter subunit (NCBI) from Escherichia coli BW25113

Subject, 529 a.a., Putative ABC transporter ATP-binding protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  167 bits (424), Expect = 3e-46
 Identities = 97/241 (40%), Positives = 141/241 (58%), Gaps = 10/241 (4%)

Query: 13  QAAQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAATLGILP-------AGVRQTAGEIL 65
           Q  +P+V+ +SL +  G  LALVG SGSGKS+T  + L +LP       +G  +  GE L
Sbjct: 19  QHVRPVVNAISLQVNAGETLALVGESGSGKSVTALSILRLLPTPPAVYLSGDIRFHGESL 78

Query: 66  ADGKPVSPCALRGIKIATIMQNPRSAFNPLHTMHTHARETCL---ALGKPADDATLTAAI 122
                 +   +RG KIA I Q P  + NPLHT+     E       + + A  A +   +
Sbjct: 79  LHASEQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMSREAARAEMIGCL 138

Query: 123 EAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESPFIIADEPTTDLDVVAQARILDL 182
           + VG+  A++ L+ YP ++SGG  QR+MIAMA+L     +IADEPTT LDV  QA+IL L
Sbjct: 139 DRVGIRQASQRLRDYPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILSL 198

Query: 183 LESIMQKQAPGMLLVTHDMGVVARLADDVAVMSDGKIVEQGDVETLFNAPKHTVTRSLVS 242
           L  + ++   G+L +TH++ +V +LAD VAVM  GK VE    +TL +AP H  T+ L++
Sbjct: 199 LRELQRELNMGLLFITHNLSIVKKLADSVAVMQHGKCVENQRADTLLSAPTHPYTQKLLN 258

Query: 243 A 243
           +
Sbjct: 259 S 259



 Score =  128 bits (322), Expect = 2e-34
 Identities = 83/234 (35%), Positives = 123/234 (52%), Gaps = 16/234 (6%)

Query: 18  LVHGVSLTLQRGRVLALVGGSGSGKSLTCAATLGILPAGVRQTAGEILADGKPVSPCALR 77
           +V+ +S TL  G  L LVG SGSGKS T  A L ++     ++ G I+ DG+ +     R
Sbjct: 301 VVNNISFTLHPGETLGLVGESGSGKSTTGLALLRLI-----RSEGRIVFDGQSLDTLNRR 355

Query: 78  GI-----KIATIMQNPRSAFNP----LHTMHTHARETCLALGKPADDATLTAAIEAVGLE 128
            +     +I  + Q+P S+ NP    L  +    R     L     +  + A +  VGL+
Sbjct: 356 QLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSGAQREQQVKAVMMEVGLD 415

Query: 129 NAARVLKLYPFEMSGGMLQRMMIAMAVLCESPFIIADEPTTDLDVVAQARILDLLESIMQ 188
              R    YP E SGG  QR+ +A A++ +   II DEPT+ LD   QA+IL LL+S+ Q
Sbjct: 416 PETR--HRYPAEFSGGQRQRIAVARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQ 473

Query: 189 KQAPGMLLVTHDMGVVARLADDVAVMSDGKIVEQGDVETLFNAPKHTVTRSLVS 242
           K     + ++HD+ VV  L   V V+  G++VEQG  E +F AP+   TR L++
Sbjct: 474 KHRLAYIFISHDLHVVRALCHQVIVLRQGEVVEQGQCERVFTAPQQAYTRQLLA 527