Pairwise Alignments

Query, 254 a.a., nickel transporter subunit (NCBI) from Escherichia coli BW25113

Subject, 530 a.a., microcin C ABC transporter ATP-binding protein YejF from Dickeya dianthicola 67-19

 Score =  171 bits (434), Expect = 2e-47
 Identities = 103/254 (40%), Positives = 148/254 (58%), Gaps = 15/254 (5%)

Query: 5   IELRNIALQ-----AAQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAATLGILPA---- 55
           +E+R++++        + +V  VSL+++ G  LALVG SGSGKS+T  + L +LP+    
Sbjct: 7   LEIRDLSIAFRNGGQQRQVVDQVSLSIEAGETLALVGESGSGKSVTALSVLRLLPSPPVV 66

Query: 56  ---GVRQTAGEILADGKPVSPCALRGIKIATIMQNPRSAFNPLHTMHTHARETCL---AL 109
              G    AGE L +        +RG +IA I Q P  + NPLHT+     E       +
Sbjct: 67  YLHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQLAEVLSLHRGM 126

Query: 110 GKPADDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESPFIIADEPTT 169
            + A    +   +E VG+  AAR L  +P ++SGG  QR+MIAMA+L +   +IADEPTT
Sbjct: 127 RRDAARGEIVGCLERVGIRQAARRLADFPHQLSGGERQRVMIAMALLTQPDLLIADEPTT 186

Query: 170 DLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSDGKIVEQGDVETLF 229
            LDV  QA+ILDLL  + Q+   G+L +TH++ +V RLAD VAVM  G+ VEQ     LF
Sbjct: 187 ALDVTVQAQILDLLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRCVEQNRTRELF 246

Query: 230 NAPKHTVTRSLVSA 243
           + P+H  TR L++A
Sbjct: 247 STPQHPYTRQLLNA 260



 Score =  120 bits (301), Expect = 6e-32
 Identities = 81/233 (34%), Positives = 123/233 (52%), Gaps = 17/233 (7%)

Query: 18  LVHGVSLTLQRGRVLALVGGSGSGKSLTCAATLGILPAGVRQTAGEILADGKPVSPCALR 77
           ++  +S +L+RG  + LVG SGSGKS T  A L +L     ++ GEI  DG+P+     +
Sbjct: 302 VLQALSFSLRRGESIGLVGESGSGKSTTGLALLRLL-----RSRGEIWFDGQPLHRFNRK 356

Query: 78  GI-----KIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAAI----EAVGLE 128
            +     +I  + Q+P  + NP   +     E  L +  P   A  T  +    + VGL+
Sbjct: 357 QMLPVRRRIQVVFQDPNGSLNPRLNVEQIIAEG-LRVHHPLSPAEQTQRVIQSMQEVGLD 415

Query: 129 NAARVLKLYPFEMSGGMLQRMMIAMAVLCESPFIIADEPTTDLDVVAQARILDLLESIMQ 188
             +R    YP E SGG  QR+ IA A++ +   +I DEPT+ LD   QA+IL LL+++ Q
Sbjct: 416 PDSR--HRYPSEFSGGQRQRIAIARALILQPELLILDEPTSSLDRTVQAQILTLLKTLQQ 473

Query: 189 KQAPGMLLVTHDMGVVARLADDVAVMSDGKIVEQGDVETLFNAPKHTVTRSLV 241
                 L ++HD+ VV  L   V V+  G++VEQG+   LF  P+   TR L+
Sbjct: 474 THQLAYLFISHDLHVVRSLCHQVIVLRHGEVVEQGECRQLFEHPQQDYTRQLL 526