Pairwise Alignments

Query, 254 a.a., nickel transporter subunit (NCBI) from Escherichia coli BW25113

Subject, 530 a.a., microcin C ABC transporter ATP-binding protein YejF from Dickeya dadantii 3937

 Score =  167 bits (423), Expect = 4e-46
 Identities = 102/254 (40%), Positives = 145/254 (57%), Gaps = 15/254 (5%)

Query: 5   IELRNIALQ-----AAQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAATLGILPA---- 55
           +E+R++++        + +V  VSL+++ G  LALVG SGSGKS+T  + L +LP+    
Sbjct: 7   LEIRDLSIAFRNGGQQRQVVDRVSLSIEAGETLALVGESGSGKSVTALSVLRLLPSPPVV 66

Query: 56  ---GVRQTAGEILADGKPVSPCALRGIKIATIMQNPRSAFNPLHTMHTHARETCL---AL 109
              G    AGE L +        +RG +IA I Q P  + NPLHT+     E       +
Sbjct: 67  YPHGDILFAGESLLNASEQRLRQVRGDRIAMIFQEPMVSLNPLHTIEKQLAEVLSLHRGM 126

Query: 110 GKPADDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESPFIIADEPTT 169
              A    +   +E VG+   AR L  +P ++SGG  QR+MIAMA+L +   +IADEPTT
Sbjct: 127 RHEAARGEIVGCLERVGIRQPARRLADFPHQLSGGERQRVMIAMALLTQPDLLIADEPTT 186

Query: 170 DLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSDGKIVEQGDVETLF 229
            LDV  QA+IL LL  + Q+   G+L +TH++ +V RLAD VAVM  G+ VEQ     LF
Sbjct: 187 ALDVTVQAQILALLNELKQELNMGLLFITHNLNIVRRLADRVAVMQAGRCVEQNQTRELF 246

Query: 230 NAPKHTVTRSLVSA 243
           +AP+H  TR L+ A
Sbjct: 247 SAPQHPYTRQLLDA 260



 Score =  123 bits (308), Expect = 9e-33
 Identities = 81/234 (34%), Positives = 125/234 (53%), Gaps = 15/234 (6%)

Query: 16  QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAATLGILPAGVRQTAGEILADGKPVSPCA 75
           +P++  +S +L+RG  + LVG SGSGKS T  A L +L     ++ GEI  DG+P+    
Sbjct: 300 KPVLQALSFSLRRGESIGLVGESGSGKSTTGLALLRLL-----RSRGEIWFDGQPLHRFN 354

Query: 76  LRGI-----KIATIMQNPRSAFNPLHTMHTHARETCLA--LGKPADDAT-LTAAIEAVGL 127
            + +     +I  + Q+P  + NP   +     E         PA+    +  A++ VGL
Sbjct: 355 RKQMLPVRRRIQVVFQDPNGSLNPRLNVEQIIAEGLRVHHRSSPAEQTQRVIQAMQEVGL 414

Query: 128 ENAARVLKLYPFEMSGGMLQRMMIAMAVLCESPFIIADEPTTDLDVVAQARILDLLESIM 187
           +  +R    YP E SGG  QR+ IA A++ +   +I DEPT+ LD   QA+IL LL+++ 
Sbjct: 415 DPDSR--HRYPSEFSGGQRQRIAIARALILQPELLILDEPTSSLDRTVQAQILALLKTLQ 472

Query: 188 QKQAPGMLLVTHDMGVVARLADDVAVMSDGKIVEQGDVETLFNAPKHTVTRSLV 241
           Q      L ++HD+ VV  L   V V+  G++VEQG+   LF  P+   TR L+
Sbjct: 473 QTHQLAYLFISHDLHVVRSLCHQVIVLRHGEVVEQGECRQLFEHPQQDYTRQLL 526