Pairwise Alignments

Query, 292 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 329 a.a., chaperonin (heat shock protein hsp33) from Agrobacterium fabrum C58

 Score =  164 bits (414), Expect = 3e-45
 Identities = 113/318 (35%), Positives = 160/318 (50%), Gaps = 46/318 (14%)

Query: 5   DQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNVLAELLVATSLLTATLKFDGD 64
           D++  +  E   VRG  V V   L  ILE HDYP  V  +LAE  V T+L+  +LKF G 
Sbjct: 17  DKVVPFQVEGLDVRGRGVQVGPLLNAILERHDYPAVVARLLAEATVLTALIGTSLKFSGK 76

Query: 65  ITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENA------DLKTLVGNGYVVITIT 118
           +TVQ +GDGP++L V + +    MR  AR   E    A        + L+GNG +  TI 
Sbjct: 77  LTVQTKGDGPVDLLVADFSAPDSMRAYARFDEERLAEAVAAGETSPEQLLGNGILAFTID 136

Query: 119 PSEG-ERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTG-------DVDGKP----A 166
              G + YQG+V L+G +L      YF +SEQLPTR  +R G       D +GKP     
Sbjct: 137 QGAGMQPYQGIVPLDGSSLEDIAGVYFRQSEQLPTR--VRLGVAEFFDRDSEGKPRHGWR 194

Query: 167 AGGMLLQVMP-------------------AQNAQQDD-FDHLATLTETIKTEELL--TLP 204
           AGG++ Q +P                       Q+DD +    TL  TI T+EL    +P
Sbjct: 195 AGGLIAQFLPQAPERLRMRDLHGGDGDEGGHEVQEDDAWTEAVTLLNTIDTDELTDPQVP 254

Query: 205 ANEVLWRLYHEEEVTVYDPQDVEFKCTCSRERCADALKTLPDEEVDSILAEDGEIDMHCD 264
              +L+RL+HE  V +YDPQ +  +C+CSR++    L     EE+ +   EDG I + C+
Sbjct: 255 VERLLYRLFHESGVRIYDPQAIFDRCSCSRDKIKGVLSGFTAEEIKA-SEEDGAIAVTCE 313

Query: 265 YCGNHYLFNAMDIAEIRN 282
           +C   Y +   D++E  N
Sbjct: 314 FCSTTYRY---DVSEFEN 328