Pairwise Alignments

Query, 445 a.a., putative amino acid/amine transport protein (VIMSS) from Escherichia coli BW25113

Subject, 539 a.a., aspartate:proton symporter from Pseudomonas simiae WCS417

 Score =  117 bits (292), Expect = 1e-30
 Identities = 100/358 (27%), Positives = 162/358 (45%), Gaps = 27/358 (7%)

Query: 5   ELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQMCVYA 64
           + +++L    +  I +G   GSG   +   V+  AG     +++++IGG  V+    VY 
Sbjct: 6   KFKKQLSLMDLTFIGLGAIFGSGWLFAASHVSAIAGPAG--IISWLIGGFAVLLLGIVYC 63

Query: 65  ELSTAYPENGADYVYLKNAGSRPLAFLSGWASFWANDAPSLSIMALAIVSNLGFLTPIDP 124
           EL  A P  G    Y   +    L +L G+ +  A      S++A+ +V++  +     P
Sbjct: 64  ELGAALPRAGGVVRYPVYSHGPLLGYLMGFITLIAFS----SLVAIEVVASRQYAAAWFP 119

Query: 125 -----------LLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIF 173
                       LG  +   L+  F +L+ RSV+  A    L+++ K I   +VIG+   
Sbjct: 120 ELTKAGSSDPTTLGWLVQFALLCLFFVLNYRSVKTFAIANNLVSVFKFIVPLLVIGVLFT 179

Query: 174 WFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALI 233
           +FK  NF        G +G  MA+ AG     ++Y G+  I  +  E+KNP +T+P ALI
Sbjct: 180 FFKPANFQVQGFAPFGLSGIEMAVSAG--GVIFAYLGLTPIISVASEVKNPQRTIPIALI 237

Query: 234 GSCLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIPALGSTAGIFVAITAMIVIL 293
            S LL   +Y LL     G +P + LAN    IS  L  +P       + V   A +V+ 
Sbjct: 238 LSVLLSTAIYVLLQTAFLGGVPTEMLANGWAGISKELA-LPYRDIALALGVGWLAYLVVA 296

Query: 294 GSL---SSC----VMYQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFF 344
            ++   S C    +   PR+ Y  A+   FFK F  +  K   P  ++ L  AL +F+
Sbjct: 297 DAVISPSGCGNIYMNATPRVVYGWAQTGTFFKIFTRIDEKSGIPRPALWLTFALSVFW 354