Pairwise Alignments

Query, 445 a.a., putative amino acid/amine transport protein (VIMSS) from Escherichia coli BW25113

Subject, 445 a.a., arginine:agmatine antiporter from Escherichia coli BL21

 Score =  133 bits (334), Expect = 1e-35
 Identities = 102/349 (29%), Positives = 153/349 (43%), Gaps = 17/349 (4%)

Query: 1   MGSQELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPQM 60
           M S     K+G   V  +  G  +GSG+F+    +A   G      L  +IG L +    
Sbjct: 1   MSSDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGL---S 57

Query: 61  CVYAELSTAYPENGADYVYLKNAGSRPLAFLSG---WASFWANDAPSLSIMALAIVSNLG 117
            VYA++S   P  G  Y Y +      L + +    W + W  +      M +  V  L 
Sbjct: 58  MVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIA----MVVIGVGYLS 113

Query: 118 FLTPI--DPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWF 175
           +  PI  DPL+       ++  F+LL++   +     Q + T+  +IP   +   G FWF
Sbjct: 114 YFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWF 173

Query: 176 KAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGS 235
           + E + A     +   G+F A+ + ++ T WS+ G+ S     G +KNP + +P A IG 
Sbjct: 174 RGETYMAAWN--VSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGG 231

Query: 236 CLLVLVLYTLLALVISGLMPFDKLANSETPISDALTWIPALGSTAGIFVAITAMIVILGS 295
            L+  V Y L    I G++P   L  S +P  DA     ALG TAG  V+  A    LGS
Sbjct: 232 VLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARM--ALGDTAGAIVSFCAAAGCLGS 289

Query: 296 LSSCVMYQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFF 344
           L    +   +   A A D LF   F  V+ K  TP   +I+ G L   F
Sbjct: 290 LGGWTLLAGQTAKAAADDGLFPPIFARVN-KAGTPVAGLIIVGILMTIF 337