Pairwise Alignments

Query, 393 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

Subject, 393 a.a., TsgA protein homolog from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  719 bits (1856), Expect = 0.0
 Identities = 356/393 (90%), Positives = 375/393 (95%)

Query: 1   MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSSMSNTFTFLNAGILISI 60
           MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYF+LPVSSMSNTFTFLNAGILISI
Sbjct: 1   MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFHLPVSSMSNTFTFLNAGILISI 60

Query: 61  FLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSAAMFILGVVSGITMSIGTFL 120
           FLNAWLMEI+PLKTQLRFGF+LMVLAVAGLMF HSLALFSAAMF+LG+VSGITMSIGTFL
Sbjct: 61  FLNAWLMEIIPLKTQLRFGFILMVLAVAGLMFGHSLALFSAAMFVLGLVSGITMSIGTFL 120

Query: 121 VTQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLARSIEWYWVYACIGLVYVAIFILT 180
           +TQ+YEGRQRGSRLLFTDSFFSMAGMIFPM+AAFLLARSIEWYWVYACIGLVY+AIFILT
Sbjct: 121 ITQLYEGRQRGSRLLFTDSFFSMAGMIFPMVAAFLLARSIEWYWVYACIGLVYLAIFILT 180

Query: 181 FGCEFPALGKHAPKTDAPVEKEKWGIGVLFLSVAALCYILGQLGFISWVPEYAKGLGMSL 240
           FGCEFPALGKHA  + APV KEKWGIGVLFL+VAALCYILGQLGFISWVPEYAKGLGMSL
Sbjct: 181 FGCEFPALGKHAQHSQAPVVKEKWGIGVLFLAVAALCYILGQLGFISWVPEYAKGLGMSL 240

Query: 241 NDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTVLAGLAAILMYVFNTGTPAHMAWSI 300
           NDAG LVS+FWMSYM GMWAFSFILRFFDLQRILTVLAG+AA+LMY+F TGT AHM W I
Sbjct: 241 NDAGALVSDFWMSYMFGMWAFSFILRFFDLQRILTVLAGMAAVLMYLFITGTQAHMPWFI 300

Query: 301 LALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVLTCGTIGTMLTFVVTGPIVEHSGPQAA 360
           L LGFFSSAIYT+IITLGSQQTKV SPKLVNF+LTCGTIGTMLTFVVTGPIV HSGPQAA
Sbjct: 301 LTLGFFSSAIYTSIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTGPIVAHSGPQAA 360

Query: 361 LLTANGLYAVVFVMCFLLGFVSRHRQHNTLTSH 393
           LLTANGLYAVVFVMCF LGFVSRHRQH+   +H
Sbjct: 361 LLTANGLYAVVFVMCFALGFVSRHRQHSAPATH 393