Pairwise Alignments

Query, 195 a.a., predicted general secretory pathway component, cryptic (NCBI) from Escherichia coli BW25113

Subject, 216 a.a., type II secretion system minor pseudopilin GspJ from Pectobacterium carotovorum WPP14

 Score = 77.8 bits (190), Expect = 1e-19
 Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 24/192 (12%)

Query: 4   RQQGFTLLEVMAALAIFSMLSVLAFMIFSQASELHQRSQKEIQQFNQLQRTITILDNDLL 63
           RQQGFTLLE++ A+AIF+ LS+ AF + +      + SQ++ ++  ++QR  + +DND  
Sbjct: 22  RQQGFTLLEMILAIAIFAALSLSAFQVLNGVMRNDEISQRKAERLAEIQRAFSQMDNDFS 81

Query: 64  QLVARRNRSTDKIMVLGEEAIFTT-----------QSRDPLAPLSEAQTLLTVHWYLRNH 112
           Q++AR +R +  +   G + + +            Q+   + P SE Q    V + LR H
Sbjct: 82  QMIARGSRGSTSMFYAGRDQLKSDDWGVSFMRNGWQNPFGILPRSELQ---PVAYRLREH 138

Query: 113 TLYRAVRTSVDGRK--DQPAQAMLEHVESFLLESNSGE--------SQELPLSVTLHLQT 162
           TL R    + D  +  D   + +L  V+ F L   S +        S +LP  + + L  
Sbjct: 139 TLERLTHVTPDPIEGLDPGVKPLLTQVDGFRLRFFSNKTWRDRWDNSTQLPQGIEVVLTL 198

Query: 163 QQYGGLQRRFAL 174
           + YG + R F +
Sbjct: 199 RDYGEMSRIFLI 210