Pairwise Alignments

Query, 310 a.a., p-hydroxybenzoic acid efflux system component (NCBI) from Escherichia coli BW25113

Subject, 285 a.a., putative membrane fusion protein (MFP) of YdhJK efflux pump from Escherichia coli BL21

 Score =  201 bits (512), Expect = 1e-56
 Identities = 111/273 (40%), Positives = 156/273 (57%), Gaps = 1/273 (0%)

Query: 14  TVVLVILAFIAIFNAWVYYTESPWTRDARFSADVVAIAPDVSGLITQVNVHDNQLVKKGQ 73
           T+++ ++A +A +  W YY +SPWTRD +  A+ V+I P VSG I ++N+ DNQLV  G 
Sbjct: 11  TIIVAVVAVLAGWWLWNYYMQSPWTRDGKIRAEQVSITPQVSGRIVELNIKDNQLVNAGD 70

Query: 74  ILFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMSREEIDQANNVLQT 133
           +L TID+  +Q A   AQA +A  Q    +   EA RR  L    +S EE+D AN  ++ 
Sbjct: 71  LLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFISAEELDTANLNVKA 130

Query: 134 VLHQLAKAQATRDLAKLDLERTVIRAPADGWVTNLNVYTGEFITRGSTAVALVKQNSFYV 193
           +   +  AQAT    +  L +T IRAP  GWVTNL    G++   G    ALV  +SFYV
Sbjct: 131 MQASVNAAQATLKQTQWQLAQTEIRAPVSGWVTNLTTRIGDYADTGKPLFALVDSHSFYV 190

Query: 194 LAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLE 253
           + Y EETKL  +R G  A+IT    NK L+G V S+   + + S   D   +  +  N+ 
Sbjct: 191 IGYFEETKLRHIREGAPAQITLYSDNKTLRGHVSSIGRAIYDQSVESDSSLIPDVKPNVP 250

Query: 254 WVRLAQRVPVRIRLDNQQENI-WPAGTTATVVV 285
           WVRLAQRVPVR  LD    ++   +GTT ++ V
Sbjct: 251 WVRLAQRVPVRFALDKVPGDVTLVSGTTCSIAV 283