Pairwise Alignments

Query, 224 a.a., predicted periplasmic chaperone protein (NCBI) from Escherichia coli BW25113

Subject, 233 a.a., P pilus assembly protein, chaperone PapD from Escherichia coli ECRC99

 Score = 57.0 bits (136), Expect = 3e-13
 Identities = 47/213 (22%), Positives = 105/213 (49%), Gaps = 12/213 (5%)

Query: 11  ITTSMNTLATGMVPETSVLLVDEKRGEASINIKNTDDHPSLLYTTIVDLPESNKSIRLIP 70
           ++ S +  A+ ++  T ++   + + E +I ++NT D P ++   + D   S+K++  +P
Sbjct: 14  MSMSSSAFASVVMTGTRIIFPGDAK-EKTIQLRNTSDQPYIINIHVEDERGSDKNVPFMP 72

Query: 71  TQPVIRVEAGQVQQVRFLLQA-TVPLQSEELKRVTFEGIP--PKDDKS-SRVTVSIRQDL 126
           T    R+EA   Q +R L     +P   E +   +F  +P   K+DKS +++ +++   +
Sbjct: 73  TPQTFRMEAAAGQALRLLYTGNNLPQDRESVFWFSFSQLPYLNKNDKSQNQLILALTNRV 132

Query: 127 PVLIHPASL-PEERETWKFLEWRKNGDQIEISNPSNYVVRMTLQFKTLPSGKTGAINKTY 185
            +   P+S+  +  +  K L ++   ++IE++NP+ Y V +    + L +GK   +  + 
Sbjct: 133 KIFYRPSSIVGKSSDAPKNLTYQVKQNRIEVTNPTGYYVTIRAA-ELLNNGKKVPLANSV 191

Query: 186 FLPHTSTT-----TALTNATDTKVEFYPASRYG 213
            +   STT     + ++ A   ++     + YG
Sbjct: 192 MIAPQSTTEWTLPSGISVAPGAQIHLVTVNDYG 224