Pairwise Alignments

Query, 224 a.a., predicted periplasmic chaperone protein (NCBI) from Escherichia coli BW25113

Subject, 241 a.a., fimbrial chaperone from Escherichia coli ECRC98

 Score = 46.2 bits (108), Expect = 5e-10
 Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 19/223 (8%)

Query: 7   FTVFITTSMNTLATGMVPETSVLLVDEKRGEASINIKNTDDHPSLLYTTIVDLPESNKS- 65
           F   +  S    A  ++  T ++   +K+ + ++ ++N  + P LL    +D  + N   
Sbjct: 13  FVSTLLASAPAFADIIISGTRIIYNADKK-DVNVRLENKGNRP-LLIQNWLDTGDDNADP 70

Query: 66  ----IRLIPTQPVIRVEA--GQVQQVRFLLQATVPLQSEELKRVTFEGIPPK----DDKS 115
               +    T PV RVE   GQ  +V +     +P   E +       +PPK    +   
Sbjct: 71  SQIKVPFTATPPVSRVEPKRGQTVKVMYTGATALPKDRESVYWFNVLEVPPKPKDAEADK 130

Query: 116 SRVTVSIRQDLPVLIHPASLP-EERETWKFLEWRKNGDQIEISNPSNYVVRMTLQFKTLP 174
           + + ++ R  + +   P+ L  E  E    + W+ N  Q++ +NP+ Y V    + K   
Sbjct: 131 NLLQLAFRTRIKLFYRPSGLQGEPAEAPAKITWKLNNAQLQANNPTPYYVSFN-EVKLES 189

Query: 175 SGKTGAINKTYFLPHTSTTTALT----NATDTKVEFYPASRYG 213
            GKT  +N +   P +  +  +T    + +  KV F   + +G
Sbjct: 190 GGKTYNVNSSMVTPFSQASFGVTSLPGSVSSGKVVFKAINDFG 232