Pairwise Alignments

Query, 224 a.a., predicted periplasmic chaperone protein (NCBI) from Escherichia coli BW25113

Subject, 246 a.a., fimbrial chaperone from Escherichia coli ECRC62

 Score = 45.4 bits (106), Expect = 9e-10
 Identities = 51/236 (21%), Positives = 102/236 (43%), Gaps = 27/236 (11%)

Query: 2   LRHITFTVFITT---SMNTLATGMVPETSVLLVDEKRGEASINIKNTDDHPSLLYTTIVD 58
           ++H T   F+T    S +++A  ++  T V+   +++   ++ ++N  ++P LL  + +D
Sbjct: 5   IKHTTALCFVTCMAFSSSSIADIVISGTRVIYKSDQKS-VNVRLENKGNNP-LLVQSWLD 62

Query: 59  LPESNK-----SIRLIPTQPVIRVEAGQVQQVRFLLQATVPLQSEELKRVTFE--GIPPK 111
             + N      ++    T PV R++A + Q ++ +  A+  L  +      F    +PPK
Sbjct: 63  TGDDNAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPK 122

Query: 112 DD-----KSSRVTVSIRQDLPVLIHPASLP-EERETWKFLEWRKNGDQ----IEISNPSN 161
            D       S + ++ R  + +   P  L     E    L+W  +G +    + ++NP+ 
Sbjct: 123 PDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTP 182

Query: 162 YVVRMTLQFKTLPSGKTGAINKTYFLPHTSTTTALT----NATDTKVEFYPASRYG 213
           Y V  +       SGK   I+     P +     +T     A+  KV FY  + +G
Sbjct: 183 YYVSFS-SGDLEASGKRYPIDVKMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFG 237