Pairwise Alignments

Query, 224 a.a., predicted periplasmic chaperone protein (NCBI) from Escherichia coli BW25113

Subject, 246 a.a., fimbrial chaperone from Escherichia coli ECOR27

 Score = 44.7 bits (104), Expect = 2e-09
 Identities = 51/235 (21%), Positives = 101/235 (42%), Gaps = 27/235 (11%)

Query: 3   RHITFTVFITT---SMNTLATGMVPETSVLLVDEKRGEASINIKNTDDHPSLLYTTIVDL 59
           +H T   F+T    S +++A  ++  T V+   +++   ++ ++N  ++P LL  + +D 
Sbjct: 6   KHTTALCFVTCMAFSSSSIADIVISGTRVIYKSDQKS-VNVRLENKGNNP-LLVQSWLDT 63

Query: 60  PESNK-----SIRLIPTQPVIRVEAGQVQQVRFLLQATVPLQSEELKRVTFE--GIPPKD 112
            + N      ++    T PV R++A + Q ++ +  A+  L  +      F    +PPK 
Sbjct: 64  GDDNAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKP 123

Query: 113 D-----KSSRVTVSIRQDLPVLIHPASLP-EERETWKFLEWRKNGDQ----IEISNPSNY 162
           D       S + ++ R  + +   P  L     E    L+W  +G +    + ++NP+ Y
Sbjct: 124 DAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPY 183

Query: 163 VVRMTLQFKTLPSGKTGAINKTYFLPHTSTTTALT----NATDTKVEFYPASRYG 213
            V  +       SGK   I+     P +     +T     A+  KV FY  + +G
Sbjct: 184 YVSFS-SGDLEASGKRYPIDVKMIAPFSDEVMKVTGLNGKASSAKVHFYAINDFG 237