Pairwise Alignments

Query, 477 a.a., D-alanyl-D-alanine carboxypeptidase (NCBI) from Escherichia coli BW25113

Subject, 486 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas simiae WCS417

 Score =  130 bits (328), Expect = 8e-35
 Identities = 130/468 (27%), Positives = 215/468 (45%), Gaps = 44/468 (9%)

Query: 4   SRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKV-------------GASAPAI 50
           S F  GL   +AFSV AA V+   T LP     AL   K+             G   P +
Sbjct: 7   SIFFAGLILPVAFSVSAAPVN---TTLPPSVQQALTKAKMQNTALSLVMIPLNGPGTPTV 63

Query: 51  DYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPT 110
            +++     PAST K++T  AAL  LGP+ ++ T   T G +  GVL G+L  + G DP 
Sbjct: 64  -FNADVSVNPASTMKLVTTYAALEMLGPNHQWKTEFYTDGTLSGGVLHGNLYLKGGGDPK 122

Query: 111 LKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGW--PWNDMTQCFSAPPAAAI 168
           L  + +  ++  L+ +GV Q+ G++++D S F +    P +    ND  + F   P A +
Sbjct: 123 LNMEKLWLLMRDLRANGVQQVTGDLVLDRSFF-NQPLLPEFNDDGNDENKPFLVKPDALL 181

Query: 169 VD--------RNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELD 220
           V+        RN     L S   P  +A IR+ +   V+   Q       + + +Y  + 
Sbjct: 182 VNLKALRFVTRNDSGRVLVSVEPP--IASIRIDNQVKVSNAKQC------TGDVRYNPVT 233

Query: 221 VVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQV 280
              G +   T++G L           ++ D A+Y    ++   K+ G T  G  + Q  V
Sbjct: 234 AADGSVT-VTVSGQLADGCSS-QTYLSLLDHATYTAGAVRAIWKELGGTIQGRDI-QAPV 290

Query: 281 NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG-HARFNVPG-TWRAGSDAVRQ 338
            +   V+A   S  L ++++ + K S+N +A  +F  +G   R +  G   +A    VRQ
Sbjct: 291 PKDAKVLARAFSPDLAEIIRDINKYSNNTMAQQLFLSLGAQFRNDADGDDAKAAQRVVRQ 350

Query: 339 ILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGS 398
            L ++ G+   + ++ +GSGLSR   ++   M  +LQ   +      +IS +P+ G DG+
Sbjct: 351 WLAKK-GITAPHLVMENGSGLSRAERVSAREMATMLQAAWKSPYAAEYISSMPITGTDGT 409

Query: 399 LQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLS 446
           ++ R  L    + G+   KTG+L  V  +AGF    +G   A V  L+
Sbjct: 410 MRKR--LKTTAMRGEAHVKTGTLNTVRAIAGFSRDNNGNTWAVVAILN 455