Pairwise Alignments

Query, 477 a.a., D-alanyl-D-alanine carboxypeptidase (NCBI) from Escherichia coli BW25113

Subject, 515 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  137 bits (345), Expect = 9e-37
 Identities = 123/453 (27%), Positives = 205/453 (45%), Gaps = 32/453 (7%)

Query: 29  QLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLET 88
           Q+PA A  AL++     +   + + +     PAS  K++T  AA+  LG DF + T   T
Sbjct: 54  QVPASALSALVISVDPDAHERLRHRAGTPVNPASVMKLVTTYAAIDLLGSDFTWNTRFYT 113

Query: 89  KGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKA 148
            G+VENGVL+G+L  R G DP    + I+     L+  GV  I G++++D S F      
Sbjct: 114 DGSVENGVLRGNLYVRGGGDPKFVLERIQEAYLALQAKGVRVILGDMVLDHSAFELPAID 173

Query: 149 PGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLP 208
           PG    +  + ++A P A +V  N  SV L   P   +    RV S  P+   +   T+P
Sbjct: 174 PGAFDGEALRPYNATPDALLV--NFKSVILTFQPDLAN-GVARVLSEPPMAGLAVDATVP 230

Query: 209 --RGSAEAQY-CELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQ 265
             RG+A   +   +     D N     G  PQ    L    A Q  ASYA   ++   + 
Sbjct: 231 LSRGTACGDWRSTVQARFDDPNSIRFEGRYPQVCGELKWPVAYQQPASYAARAMEGLWRA 290

Query: 266 AGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH----- 320
           +G + +G +   T   E   ++   +S PL +++  + + S+N++A  VF  +G      
Sbjct: 291 SGGSITGQVRDGTMPAEV-QLLHEARSLPLSEVIVDVNQWSNNVMAQQVFLTLGQLAPPQ 349

Query: 321 ---------ARFNV--------PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHN 363
                    AR +         P  +    + V    ++  G  +   ++ +GSGLSR  
Sbjct: 350 TATPALAAVARGSAADRLVPSRPARFEYSREVVTDWWKRTFGPRVPGPVLDNGSGLSRDE 409

Query: 364 LIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQG 423
            I P  +  +L++ A+H   + F+  L +AG  G+    A   Q+   G    KTG+L+ 
Sbjct: 410 RITPEALAGLLRHAARHPQGVQFVQSLSIAGVSGTAARLARGGQSAARGNAWVKTGTLRD 469

Query: 424 VYNLAGFITTASGQR---MAFVQYLSGYAVEPA 453
           V  +AG++  ++G R   + F+ + +  A  PA
Sbjct: 470 VTGIAGYVNASNGARYVVVGFINHPNAAAARPA 502