Pairwise Alignments

Query, 477 a.a., D-alanyl-D-alanine carboxypeptidase (NCBI) from Escherichia coli BW25113

Subject, 477 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Dickeya dadantii 3937

 Score =  760 bits (1963), Expect = 0.0
 Identities = 370/477 (77%), Positives = 417/477 (87%)

Query: 1   MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60
           MRF   + G    +A    AA +DEY   LP GANLAL+VQKVGAS P +DYHSQQMALP
Sbjct: 1   MRFLSILTGFAYVVALQANAAPIDEYTKYLPDGANLALVVQKVGASTPTVDYHSQQMALP 60

Query: 61  ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120
           ASTQKVITALAAL+QLGPD+RF TT+E+ G + NGVL+G+L  RF  DP+LKRQ +RNMV
Sbjct: 61  ASTQKVITALAALLQLGPDYRFVTTMESSGTLTNGVLRGNLAVRFSGDPSLKRQQLRNMV 120

Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180
             LKK G+ +I G+VLIDTS+FASHDKAPGWPWNDMTQCFSAPPAAAIVD+NCFS+SLYS
Sbjct: 121 QELKKRGIREISGDVLIDTSVFASHDKAPGWPWNDMTQCFSAPPAAAIVDKNCFSISLYS 180

Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240
           APK GD AFIRVASYYPV MFS+VRTLP+GS +AQYCELDVVPG+LNRFT+TGCL QR+E
Sbjct: 181 APKAGDNAFIRVASYYPVQMFSEVRTLPKGSPDAQYCELDVVPGELNRFTVTGCLTQRAE 240

Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300
           PLPLAFA+QDGASYAGAI+KDEL+QA I  +G+L RQ+    PGTV+   +S PLH+LL 
Sbjct: 241 PLPLAFAIQDGASYAGAIVKDELQQADIRIAGSLRRQSLPGAPGTVLVQTESEPLHELLT 300

Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360
            MLKKSDNMIADTVFR IGH RF VPGTWRAG+DAVRQILRQ+AG+D+GNTII DGSGLS
Sbjct: 301 TMLKKSDNMIADTVFRTIGHERFKVPGTWRAGADAVRQILRQKAGIDLGNTIIVDGSGLS 360

Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420
           RHNLIAPATMMQVLQYIAQHDNELN+I MLPLAGYDG+L+YRAGLH+AG+DGKVSAKTG+
Sbjct: 361 RHNLIAPATMMQVLQYIAQHDNELNYIKMLPLAGYDGTLRYRAGLHEAGLDGKVSAKTGA 420

Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477
           LQGVYNLAGFITTASGQRMAFVQYLSGYAV P DQ+ RRIPLVRFESR+YKDIYQNN
Sbjct: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVPPEDQKERRIPLVRFESRVYKDIYQNN 477