Pairwise Alignments

Query, 211 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 326 a.a., NADH-ubiquinone oxidoreductase from Agrobacterium fabrum C58

 Score = 44.7 bits (104), Expect = 2e-09
 Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 11/155 (7%)

Query: 4   VLITGATGLVGGHLLRMLINEPKVNAIA------APTRRPLGDMPGV-FNPHDPQLSDAL 56
           V + G +G VG H++RML        +A      A   +PLG++  + F   + +  D++
Sbjct: 10  VTVFGGSGFVGRHVVRMLAKRGYRIRVAVRRPDLAGFLQPLGNVGQISFAQANLRYRDSI 69

Query: 57  AQVTDPIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLGAQHMLVVSAMGANA 116
            +  +  D V  C+G    E+G +  F           A   R  GA  +  +SA+GA+A
Sbjct: 70  IKAVEDADHVVNCVGILA-ESG-RNTFDAVQEFGAKAIAEAARDTGAT-LTHISAIGADA 126

Query: 117 HSPFFYNRVKGEMEEALIAQNWPKLTIARPSMLLG 151
           +S   Y R KG   EA I    P   I RPS++ G
Sbjct: 127 NSQTGYGRTKGR-AEAAIHSVLPGAVILRPSIIFG 160