Pairwise Alignments

Query, 838 a.a., predicted outer membrane protein (NCBI) from Escherichia coli BW25113

Subject, 869 a.a., putative outer membrane export usher protein from Escherichia coli BL21

 Score =  567 bits (1460), Expect = e-165
 Identities = 318/840 (37%), Positives = 471/840 (56%), Gaps = 55/840 (6%)

Query: 42  EYYFDPIMLETTKSGMQTTDLSRFSKKYAQLPGTYQVDIWLNKKKVSQKKITFTANAEQL 101
           E YF+P  L   ++G    DLSRF +   Q  G Y+VD+W N + +  + I F +  E  
Sbjct: 36  ESYFNPAFL--LENGTSVADLSRFERGNHQPAGVYRVDLWRNDEFIGSQDIVFESTTENT 93

Query: 102 ------LQPQFTVEQLRELGIKVDEIPALAEKDDDSVINSLEQIIPGTAAEFDFNHQQLN 155
                 L P F    L  +G+     P LA++ ++  IN L+ + P     FDF   +LN
Sbjct: 94  GDKSGGLMPCFNQVLLERIGLNSSAFPELAQQQNNKCINLLKAV-PDATINFDFAAMRLN 152

Query: 156 LSIPQIALYRDARGYVSPSRWDDGIPTLFTNYSFTGSDNRYRQGNRSQRQYLNMQNGANF 215
           ++IPQIAL   A GY+ P  WD+GIP L  NY+FTG+     +GN +   + +  +G N 
Sbjct: 153 ITIPQIALLSSAHGYIPPEEWDEGIPALLLNYNFTGN-----RGNGNDSYFFSELSGINI 207

Query: 216 GPWRLRNYSTWT----RNDQTSSWNTISSYLQRDIKALKSQLLLGESATSGSIFSSYTFT 271
           GPWRLRN  +W         +  WN I +++QR I  LKS+L++G+  T   IF    F 
Sbjct: 208 GPWRLRNNGSWNYFRGNGYHSEQWNNIGTWVQRAIIPLKSELVMGDGNTGSDIFDGVGFR 267

Query: 272 GVQLASDDNMLPNSQRGFAPTVRGIANSSAIVTIRQNGYVIYQSNVSAGAFEINDLYPSS 331
           GV+L S DNM P+SQ+GFAPTV GIA ++A +TIRQNG++IYQS VS GAFEI DL+P+S
Sbjct: 268 GVRLYSSDNMYPDSQQGFAPTVHGIARTAAQLTIRQNGFIIYQSYVSPGAFEITDLHPTS 327

Query: 332 NSGDLEVTIEESDGTQRRFIQPYSSLPMMQRPGHLKYSATAGRYRADANSDSKEPEFAEA 391
           ++GDL+VTI+E DG Q+ +  PYS++P++QR G  K+  TAG +R+  NS    P F + 
Sbjct: 328 SNGDLDVTIDERDGNQQNYTIPYSTVPILQREGRFKFDLTAGDFRS-GNSQQSSPFFFQG 386

Query: 392 TAIYGLNNTFTLYGGLLGSEDYYALGIGIGGTLGALGALSMDINRADTQFDNQHSFHGYQ 451
           TA+ GL   FT YGG   S +Y A  +G+G  LG  GA+S+D+  A +Q  +     G  
Sbjct: 387 TALGGLPQEFTAYGGTQLSANYTAFLLGLGRNLGNWGAVSLDVTHARSQLADDSRHEGDS 446

Query: 452 WRTQYIKDIPETNTNIAVSYYRYTNDGYFSFNEANTR-------NWDYNSRQKSE----- 499
            R  Y K +    TN  +  YRY+  G+++ ++   R       ++DY+   + E     
Sbjct: 447 IRFLYAKSMNTFGTNFQLMGYRYSTQGFYTLDDVAYRRMEGYEYDYDYDGEHRDEPIIVN 506

Query: 500 -----------IQFNISQTIFDGVSLYASGSQQDYWGNNDKNRNISVGVSGQQWGVGYSL 548
                      +Q NISQ++ D  SLY SG+ Q YW  +D +    VG +    G+ YSL
Sbjct: 507 YHNLRFSRKDRLQLNISQSLNDFGSLYISGTHQKYWNTSDSDTWYQVGYTSSWVGISYSL 566

Query: 549 NYQYSRYTD-QNNDRALSLNLSIPL----------ERWLPRSRVSYQMTSQKDRPTQHEM 597
           ++ ++      +N+R + LN+S+P           E  L R+  S+      +       
Sbjct: 567 SFSWNESVGIPDNERIVGLNVSVPFNVLTKRRYTRENALDRAYASFNANRNSNGQNSWLA 626

Query: 598 RLDGSLLDDGRLSYSLEQSLDDDNNHNSSLNASYRSPYGTFSAGYSYGNDSSQYNYGVTG 657
            + G+LL+   LSY + Q    +N +  S  A++++ YGT   GY+Y  D    N+ ++G
Sbjct: 627 GVGGTLLEGHNLSYHVSQGDTSNNGYTGSATANWQAAYGTLGVGYNYDRDQHDVNWQLSG 686

Query: 658 GVVIHPHGVTLSQYLGNAFALIDANGASGVRIQNYPGIATDPFGYAVVPYLTTYQENRLS 717
           GVV H +G+TLSQ LG+   LI A GA GVRI+N  GI TD  GYAV+PY T Y+ NR++
Sbjct: 687 GVVGHENGITLSQPLGDTNVLIKAPGAGGVRIENQTGILTDWRGYAVMPYATVYRYNRIA 746

Query: 718 VDTTQLPDNVDLEQTTQFVVPNRGAMVAARFNANIGYRVLVTVSDRNGKPLPFGALASND 777
           +DT  + +++D+E+    VVP +GA+V A F+  IG R L+TV+ + GKP+PFG+L   +
Sbjct: 747 LDTNTMGNSIDVEKNISSVVPTQGALVRANFDTRIGVRALITVT-QGGKPVPFGSLVREN 805

Query: 778 DTGQQSIVDEGGILYLSGISSKSQSWTVRWGNQADQQCQFAFSTPDSEPTTSVLQGTAQC 837
            TG  S+V + G +YLSG +  S    V+WG+ A+ +C   +  P      +V   +A C
Sbjct: 806 STGITSMVGDDGQVYLSG-APLSGELLVQWGDGANSRCIAHYVLPKQSLQQAVTVISAVC 864